Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299234 |
| length | 628 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 5 |
| gene id | sinup |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 10636501 ~ 10638718 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299029 | lncRNA | downstream | 239783 | 10396395 ~ 10396740 (-) | True | G252610 |
| XR_004579740.1 | lncRNA | downstream | 347839 | 10244041 ~ 10288684 (-) | False | LOC117599279 |
| TU299250 | lncRNA | upstream | 16596 | 10655314 ~ 10655522 (-) | True | G252783 |
| TU299304 | lncRNA | upstream | 71677 | 10710395 ~ 10711491 (-) | True | G252833 |
| TU299329 | lncRNA | upstream | 140267 | 10778985 ~ 10779600 (-) | True | G252856 |
| TU299332 | lncRNA | upstream | 143417 | 10782135 ~ 10782588 (-) | True | G252859 |
| TU299403 | lncRNA | upstream | 226642 | 10865360 ~ 10865700 (-) | True | G252920 |
| XM_026921073.2 | mRNA | downstream | 6262 | 10625640 ~ 10630261 (-) | True | LOC113530767 |
| XM_026920104.2 | mRNA | downstream | 12730 | 10620673 ~ 10623793 (-) | True | tnnc2 |
| XM_026920647.2 | mRNA | downstream | 16858 | 10608893 ~ 10619665 (-) | False | LOC113530527 |
| XM_034311722.1 | mRNA | downstream | 19007 | 10570109 ~ 10617516 (-) | True | LOC113530527 |
| XM_026920646.2 | mRNA | downstream | 19018 | 10608893 ~ 10617505 (-) | False | LOC113530527 |
| XM_026921072.2 | mRNA | upstream | 157089 | 10795807 ~ 10798598 (-) | True | tnnc1b |
| XM_034311977.1 | mRNA | upstream | 214299 | 10853017 ~ 10856962 (-) | False | cfap126 |
| XM_026920887.2 | mRNA | upstream | 214299 | 10853017 ~ 10856962 (-) | True | cfap126 |
| XM_026921244.2 | mRNA | upstream | 293388 | 10932106 ~ 10941252 (-) | True | emd |
| XM_034311886.1 | mRNA | upstream | 304157 | 10942875 ~ 10973775 (-) | True | flna |
| XR_003403171.2 | other | downstream | 166989 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU298725 | other | downstream | 606530 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403155.2 | other | downstream | 2057923 | 8566656 ~ 8578600 (-) | False | ttll10 |
| TU296847 | other | downstream | 3126776 | 7476274 ~ 7509747 (-) | False | ctnnbip1 |
| TU296070 | other | downstream | 4328760 | 6304844 ~ 6307763 (-) | False | rps26 |
| TU299470 | other | upstream | 375246 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| trnae-uuc_4 | other | upstream | 620325 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| trnan-guu_24 | other | upstream | 634612 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| TU299993 | other | upstream | 817303 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 817303 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
