Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403161.2 |
| length | 756 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC113530615 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11089065 ~ 11091335 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403192.2 | lncRNA | downstream | 50097 | 11037822 ~ 11038968 (-) | True | LOC113530895 |
| TU299474 | lncRNA | downstream | 66040 | 11021959 ~ 11023025 (-) | False | abhd6b |
| TU299471 | lncRNA | downstream | 73435 | 11009824 ~ 11015630 (-) | True | LOC113530950 |
| TU299468 | lncRNA | downstream | 82448 | 11005952 ~ 11006617 (-) | True | G252969 |
| TU299463 | lncRNA | downstream | 91629 | 10994816 ~ 10997436 (-) | True | G252967 |
| TU299705 | lncRNA | upstream | 173623 | 11264909 ~ 11265149 (-) | True | G253174 |
| TU299971 | lncRNA | upstream | 262216 | 11353502 ~ 11354217 (-) | True | G253383 |
| TU299973 | lncRNA | upstream | 268229 | 11359515 ~ 11361585 (-) | True | G253385 |
| TU299972 | lncRNA | upstream | 271686 | 11362972 ~ 11364414 (-) | True | G253384 |
| XR_003403134.2 | lncRNA | upstream | 364734 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| XM_026920265.2 | mRNA | downstream | 39330 | 11043263 ~ 11049735 (-) | True | atp6ap1lb |
| XM_026921269.2 | mRNA | downstream | 49610 | 11030067 ~ 11039455 (-) | False | slmapb |
| XM_026921268.2 | mRNA | downstream | 49610 | 11030067 ~ 11039455 (-) | True | slmapb |
| XM_034312050.1 | mRNA | downstream | 64056 | 11020531 ~ 11025009 (-) | True | abhd6b |
| XM_026920311.2 | mRNA | downstream | 69350 | 11016816 ~ 11019715 (-) | False | kctd6b |
| XM_026920729.2 | mRNA | upstream | 22993 | 11114279 ~ 11115673 (-) | True | LOC113530590 |
| XM_026920567.2 | mRNA | upstream | 146966 | 11238252 ~ 11242304 (-) | True | apobec2b |
| XM_026920565.2 | mRNA | upstream | 156366 | 11247652 ~ 11254606 (-) | True | si:dkey-109j17.5 |
| XM_034311770.1 | mRNA | upstream | 156366 | 11247652 ~ 11253543 (-) | False | si:dkey-109j17.5 |
| XM_034311771.1 | mRNA | upstream | 156366 | 11247652 ~ 11253542 (-) | False | si:dkey-109j17.5 |
| TU299470 | other | downstream | 73435 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| TU299234 | other | downstream | 450347 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 619531 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU298725 | other | downstream | 1059072 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403155.2 | other | downstream | 2510465 | 8566656 ~ 8578600 (-) | False | ttll10 |
| trnae-uuc_4 | other | upstream | 167757 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| trnan-guu_24 | other | upstream | 182044 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| TU299993 | other | upstream | 364735 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 364735 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 465601 | 11556887 ~ 11568530 (-) | False | avpr2ab |
