Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403192.2 |
| length | 1054 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | LOC113530895 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11037822 ~ 11038968 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299474 | lncRNA | downstream | 14797 | 11021959 ~ 11023025 (-) | False | abhd6b |
| TU299471 | lncRNA | downstream | 22192 | 11009824 ~ 11015630 (-) | True | LOC113530950 |
| TU299468 | lncRNA | downstream | 31205 | 11005952 ~ 11006617 (-) | True | G252969 |
| TU299463 | lncRNA | downstream | 40386 | 10994816 ~ 10997436 (-) | True | G252967 |
| TU299464 | lncRNA | downstream | 40386 | 10994816 ~ 10997436 (-) | False | G252967 |
| XR_003403161.2 | lncRNA | upstream | 50097 | 11089065 ~ 11091286 (-) | False | LOC113530615 |
| TU299537 | lncRNA | upstream | 50109 | 11089077 ~ 11090683 (-) | True | LOC113530615 |
| TU299539 | lncRNA | upstream | 50109 | 11089077 ~ 11091335 (-) | False | LOC113530615 |
| TU299705 | lncRNA | upstream | 225941 | 11264909 ~ 11265149 (-) | True | G253174 |
| TU299971 | lncRNA | upstream | 314534 | 11353502 ~ 11354217 (-) | True | G253383 |
| XM_034312050.1 | mRNA | downstream | 12813 | 11020531 ~ 11025009 (-) | True | abhd6b |
| XM_026920311.2 | mRNA | downstream | 18107 | 11016816 ~ 11019715 (-) | False | kctd6b |
| XM_026920310.2 | mRNA | downstream | 18107 | 11016816 ~ 11019715 (-) | True | kctd6b |
| XM_034312181.1 | mRNA | downstream | 22156 | 11009463 ~ 11015666 (-) | False | LOC113530950 |
| XM_026920265.2 | mRNA | upstream | 4295 | 11043263 ~ 11049735 (-) | True | atp6ap1lb |
| XM_026920729.2 | mRNA | upstream | 75311 | 11114279 ~ 11115673 (-) | True | LOC113530590 |
| XM_026920567.2 | mRNA | upstream | 199284 | 11238252 ~ 11242304 (-) | True | apobec2b |
| XM_026920565.2 | mRNA | upstream | 208684 | 11247652 ~ 11254606 (-) | True | si:dkey-109j17.5 |
| XM_034311770.1 | mRNA | upstream | 208684 | 11247652 ~ 11253543 (-) | False | si:dkey-109j17.5 |
| TU299470 | other | downstream | 22192 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| TU299234 | other | downstream | 399104 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 568288 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU298725 | other | downstream | 1007829 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403155.2 | other | downstream | 2459222 | 8566656 ~ 8578600 (-) | False | ttll10 |
| trnae-uuc_4 | other | upstream | 220075 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| trnan-guu_24 | other | upstream | 234362 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| TU299993 | other | upstream | 417053 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 417053 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 517919 | 11556887 ~ 11568530 (-) | False | avpr2ab |
