Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034299311.1 |
| length | 1199 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 7 |
| gene id | LOC113524981 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1268309 ~ 1278867 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577150.1 | lncRNA | downstream | 4014 | 1264805 ~ 1266121 (-) | True | LOC117595969 |
| TU412372 | lncRNA | downstream | 38294 | 1231235 ~ 1231841 (-) | True | G348003 |
| TU412347 | lncRNA | downstream | 92965 | 1174117 ~ 1177170 (-) | True | G347980 |
| TU412326 | lncRNA | downstream | 167251 | 1083752 ~ 1102884 (-) | True | G347963 |
| TU412231 | lncRNA | downstream | 196434 | 1056423 ~ 1073701 (-) | False | G347896 |
| XR_004577145.1 | lncRNA | upstream | 30822 | 1309689 ~ 1311494 (-) | True | LOC117595965 |
| XR_004577144.1 | lncRNA | upstream | 59941 | 1338808 ~ 1339841 (-) | True | LOC113524984 |
| TU412383 | lncRNA | upstream | 122989 | 1401856 ~ 1402831 (-) | True | G348011 |
| TU412384 | lncRNA | upstream | 130094 | 1408961 ~ 1463632 (-) | True | G348012 |
| TU412244 | lncRNA | upstream | 168947 | 1447814 ~ 1467707 (-) | False | G347896 |
| XM_034299263.1 | mRNA | downstream | 12193 | 1251870 ~ 1257942 (-) | True | LOC117595953 |
| XM_034299280.1 | mRNA | downstream | 30045 | 927109 ~ 1240090 (-) | True | LOC113524993 |
| XM_034299350.1 | mRNA | downstream | 30086 | 1236871 ~ 1240049 (-) | True | LOC117595980 |
| XM_034299256.1 | mRNA | downstream | 39487 | 1188924 ~ 1230648 (-) | False | tchp |
| XM_026911379.2 | mRNA | downstream | 39487 | 1188924 ~ 1230648 (-) | False | tchp |
| XM_034299351.1 | mRNA | upstream | 15007 | 1293874 ~ 1297808 (-) | True | LOC117595981 |
| XM_034299352.1 | mRNA | upstream | 35632 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_034299353.1 | mRNA | upstream | 71449 | 1350316 ~ 1420706 (-) | True | LOC113524983 |
| XM_034299285.1 | mRNA | upstream | 79691 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_026911400.2 | mRNA | upstream | 146232 | 1425099 ~ 1431481 (-) | True | LOC113524989 |
| TU412323 | other | downstream | 190996 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 345512 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 902400 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 1032863 | 230525 ~ 237272 (-) | False | LOC117595925 |
| TU412381 | other | upstream | 77701 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| XR_003404300.2 | other | upstream | 228748 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 248725 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| XR_004577143.1 | other | upstream | 249911 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| trnak-uuu_19 | other | upstream | 319603 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
