Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437049 |
| length | 828 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | rasd3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 591136 ~ 592595 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437043 | lncRNA | downstream | 9392 | 578593 ~ 581860 (-) | True | G368903 |
| TU436801 | lncRNA | downstream | 301373 | 284881 ~ 289879 (-) | False | pmm2 |
| TU436824 | lncRNA | downstream | 309349 | 281439 ~ 281903 (-) | True | G368725 |
| TU436806 | lncRNA | downstream | 346472 | 244177 ~ 244780 (-) | True | G368713 |
| TU436775 | lncRNA | downstream | 369496 | 219384 ~ 221756 (-) | False | si:dkeyp-75b4.8 |
| TU437060 | lncRNA | upstream | 79561 | 671640 ~ 673030 (-) | True | G368912 |
| TU437062 | lncRNA | upstream | 79561 | 671640 ~ 673030 (-) | False | G368912 |
| TU437096 | lncRNA | upstream | 109005 | 701084 ~ 701288 (-) | True | G368944 |
| TU437066 | lncRNA | upstream | 109537 | 701616 ~ 701979 (-) | False | prkcba |
| TU437270 | lncRNA | upstream | 277808 | 869887 ~ 948803 (-) | False | zgc:77849 |
| XM_026929181.2 | mRNA | downstream | 1856 | 582498 ~ 589396 (-) | True | plk1 |
| XM_034299924.1 | mRNA | downstream | 33040 | 544258 ~ 558212 (-) | False | chtf18 |
| XM_034299922.1 | mRNA | downstream | 33040 | 544258 ~ 558212 (-) | False | chtf18 |
| XM_034299921.1 | mRNA | downstream | 33040 | 544258 ~ 558212 (-) | False | chtf18 |
| XM_034299920.1 | mRNA | downstream | 33040 | 544258 ~ 558212 (-) | True | chtf18 |
| XM_034300403.1 | mRNA | upstream | 53397 | 645476 ~ 651428 (-) | True | LOC113535779 |
| XM_034300404.1 | mRNA | upstream | 61374 | 653453 ~ 702345 (-) | True | prkcba |
| XM_026929176.2 | mRNA | upstream | 111120 | 703199 ~ 711315 (-) | True | tlr2 |
| XM_034300162.1 | mRNA | upstream | 111120 | 703199 ~ 708240 (-) | False | tlr2 |
| XM_026928986.2 | mRNA | upstream | 277680 | 869759 ~ 879270 (-) | True | zgc:77849 |
| XR_004577324.1 | other | downstream | 364150 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| TU437316 | other | upstream | 319474 | 911553 ~ 915683 (-) | True | G369125 |
| TU437448 | other | upstream | 683942 | 1276021 ~ 1276813 (-) | True | G369242 |
| XR_004577318.1 | other | upstream | 949283 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437816 | other | upstream | 1200108 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_003403632.2 | other | upstream | 1974678 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
