Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437096 |
| length | 205 |
| lncRNA type | intronic |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G368944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 701084 ~ 701288 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437060 | lncRNA | downstream | 28054 | 671640 ~ 673030 (-) | True | G368912 |
| TU437062 | lncRNA | downstream | 28054 | 671640 ~ 673030 (-) | False | G368912 |
| TU437049 | lncRNA | downstream | 109005 | 591252 ~ 592079 (-) | False | rasd3 |
| TU437043 | lncRNA | downstream | 119224 | 578593 ~ 581860 (-) | True | G368903 |
| TU436801 | lncRNA | downstream | 411205 | 284881 ~ 289879 (-) | False | pmm2 |
| TU437066 | lncRNA | upstream | 328 | 701616 ~ 701979 (-) | False | prkcba |
| TU437270 | lncRNA | upstream | 168599 | 869887 ~ 948803 (-) | False | zgc:77849 |
| TU437326 | lncRNA | upstream | 170301 | 871589 ~ 875203 (-) | True | G369130 |
| TU437443 | lncRNA | upstream | 565418 | 1266706 ~ 1270364 (-) | True | LOC117596193 |
| XR_004577363.1 | lncRNA | upstream | 565793 | 1267081 ~ 1270425 (-) | False | LOC117596193 |
| XM_034300403.1 | mRNA | downstream | 49656 | 645476 ~ 651428 (-) | True | LOC113535779 |
| XM_026929185.2 | mRNA | downstream | 108489 | 591136 ~ 592595 (-) | True | rasd3 |
| XM_026929181.2 | mRNA | downstream | 111688 | 582498 ~ 589396 (-) | True | plk1 |
| XM_034299921.1 | mRNA | downstream | 142872 | 544258 ~ 558212 (-) | False | chtf18 |
| XM_026929176.2 | mRNA | upstream | 1911 | 703199 ~ 711315 (-) | True | tlr2 |
| XM_034300162.1 | mRNA | upstream | 1911 | 703199 ~ 708240 (-) | False | tlr2 |
| XM_026928986.2 | mRNA | upstream | 168471 | 869759 ~ 879270 (-) | True | zgc:77849 |
| XM_026928831.2 | mRNA | upstream | 195936 | 897224 ~ 902489 (-) | True | fscn1b |
| XM_026929344.2 | mRNA | upstream | 262567 | 963855 ~ 969617 (-) | True | smcr8b |
| XR_004577324.1 | other | downstream | 473982 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| TU437316 | other | upstream | 210265 | 911553 ~ 915683 (-) | True | G369125 |
| TU437448 | other | upstream | 574733 | 1276021 ~ 1276813 (-) | True | G369242 |
| XR_004577318.1 | other | upstream | 840074 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437816 | other | upstream | 1090899 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_003403632.2 | other | upstream | 1865469 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
