Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437443 |
| length | 1069 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 3 |
| gene id | LOC117596193 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 1266706 ~ 1270425 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0044427 | obsolete chromosomal part | cellular_component |
| id | description |
|---|---|
| ko04110 | Cell cycle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437270 | lncRNA | downstream | 317903 | 869887 ~ 948803 (-) | False | zgc:77849 |
| TU437326 | lncRNA | downstream | 391503 | 871589 ~ 875203 (-) | True | G369130 |
| TU437066 | lncRNA | downstream | 564727 | 701616 ~ 701979 (-) | False | prkcba |
| TU437096 | lncRNA | downstream | 565418 | 701084 ~ 701288 (-) | True | G368944 |
| TU437060 | lncRNA | downstream | 593676 | 671640 ~ 673030 (-) | True | G368912 |
| TU437449 | lncRNA | upstream | 6709 | 1277073 ~ 1277650 (-) | True | G369243 |
| TU437513 | lncRNA | upstream | 94999 | 1365363 ~ 1375213 (-) | True | G369298 |
| TU437512 | lncRNA | upstream | 99770 | 1370134 ~ 1396598 (-) | True | G369297 |
| TU437517 | lncRNA | upstream | 114557 | 1384921 ~ 1385662 (-) | True | G369302 |
| TU437520 | lncRNA | upstream | 126240 | 1396604 ~ 1396905 (-) | True | G369305 |
| XM_034300143.1 | mRNA | downstream | 20665 | 1204764 ~ 1246041 (-) | True | slc5a10 |
| XM_034300142.1 | mRNA | downstream | 76158 | 1167628 ~ 1190548 (-) | True | LOC113535776 |
| XM_026928797.2 | mRNA | downstream | 153107 | 1052390 ~ 1113599 (-) | True | cacna1hb |
| XM_034299982.1 | mRNA | downstream | 240685 | 987755 ~ 1026021 (-) | True | myo15ab |
| XM_026929168.2 | mRNA | downstream | 280136 | 980870 ~ 986570 (-) | True | alkbh5 |
| XM_026928712.2 | mRNA | upstream | 85359 | 1355723 ~ 1365906 (-) | True | LOC113535431 |
| XM_034300032.1 | mRNA | upstream | 241957 | 1512321 ~ 1518371 (-) | False | en1b |
| XM_034300031.1 | mRNA | upstream | 241957 | 1512321 ~ 1518371 (-) | True | en1b |
| XM_034300164.1 | mRNA | upstream | 268089 | 1538453 ~ 1599742 (-) | False | nrp2a |
| XM_034300165.1 | mRNA | upstream | 270998 | 1541362 ~ 1599744 (-) | True | nrp2a |
| TU437316 | other | downstream | 351023 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 1039604 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| TU437448 | other | upstream | 5657 | 1276021 ~ 1276813 (-) | True | G369242 |
| XR_004577318.1 | other | upstream | 270998 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437816 | other | upstream | 521823 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_003403632.2 | other | upstream | 1296393 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 1572848 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
