Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437449 |
| length | 578 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G369243 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 1277073 ~ 1277650 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577363.1 | lncRNA | downstream | 6648 | 1267081 ~ 1270425 (-) | False | LOC117596193 |
| TU437443 | lncRNA | downstream | 6709 | 1266706 ~ 1270364 (-) | True | LOC117596193 |
| TU437270 | lncRNA | downstream | 328270 | 869887 ~ 948803 (-) | False | zgc:77849 |
| TU437326 | lncRNA | downstream | 401870 | 871589 ~ 875203 (-) | True | G369130 |
| TU437066 | lncRNA | downstream | 575094 | 701616 ~ 701979 (-) | False | prkcba |
| TU437513 | lncRNA | upstream | 87713 | 1365363 ~ 1375213 (-) | True | G369298 |
| TU437512 | lncRNA | upstream | 92484 | 1370134 ~ 1396598 (-) | True | G369297 |
| TU437517 | lncRNA | upstream | 107271 | 1384921 ~ 1385662 (-) | True | G369302 |
| TU437520 | lncRNA | upstream | 118954 | 1396604 ~ 1396905 (-) | True | G369305 |
| TU437731 | lncRNA | upstream | 215049 | 1492699 ~ 1574665 (-) | True | G369506 |
| XM_034300143.1 | mRNA | downstream | 31032 | 1204764 ~ 1246041 (-) | True | slc5a10 |
| XM_034300142.1 | mRNA | downstream | 86525 | 1167628 ~ 1190548 (-) | True | LOC113535776 |
| XM_026928797.2 | mRNA | downstream | 163474 | 1052390 ~ 1113599 (-) | True | cacna1hb |
| XM_034299982.1 | mRNA | downstream | 251052 | 987755 ~ 1026021 (-) | True | myo15ab |
| XM_026929168.2 | mRNA | downstream | 290503 | 980870 ~ 986570 (-) | True | alkbh5 |
| XM_026928712.2 | mRNA | upstream | 78073 | 1355723 ~ 1365906 (-) | True | LOC113535431 |
| XM_034300032.1 | mRNA | upstream | 234671 | 1512321 ~ 1518371 (-) | False | en1b |
| XM_034300031.1 | mRNA | upstream | 234671 | 1512321 ~ 1518371 (-) | True | en1b |
| XM_034300164.1 | mRNA | upstream | 260803 | 1538453 ~ 1599742 (-) | False | nrp2a |
| XM_034300165.1 | mRNA | upstream | 263712 | 1541362 ~ 1599744 (-) | True | nrp2a |
| TU437448 | other | downstream | 260 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 361390 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 1049971 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_004577318.1 | other | upstream | 263712 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437816 | other | upstream | 514537 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_003403632.2 | other | upstream | 1289107 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 1565562 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 3179785 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
