Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437520 |
| length | 302 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G369305 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 1396604 ~ 1396905 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437512 | lncRNA | downstream | 6 | 1370134 ~ 1396598 (-) | True | G369297 |
| TU437517 | lncRNA | downstream | 10942 | 1384921 ~ 1385662 (-) | True | G369302 |
| TU437513 | lncRNA | downstream | 21391 | 1365363 ~ 1375213 (-) | True | G369298 |
| TU437449 | lncRNA | downstream | 118954 | 1277073 ~ 1277650 (-) | True | G369243 |
| XR_004577363.1 | lncRNA | downstream | 126179 | 1267081 ~ 1270425 (-) | False | LOC117596193 |
| TU437731 | lncRNA | upstream | 95794 | 1492699 ~ 1574665 (-) | True | G369506 |
| TU437748 | lncRNA | upstream | 141172 | 1538077 ~ 1588650 (-) | True | G369523 |
| TU437747 | lncRNA | upstream | 144585 | 1541490 ~ 1611666 (-) | False | nrp2a |
| TU437818 | lncRNA | upstream | 379414 | 1776319 ~ 1795224 (-) | False | G369586 |
| TU437802 | lncRNA | upstream | 388648 | 1785553 ~ 1823504 (-) | True | G369573 |
| XM_026928712.2 | mRNA | downstream | 30698 | 1355723 ~ 1365906 (-) | True | LOC113535431 |
| XM_034300143.1 | mRNA | downstream | 150563 | 1204764 ~ 1246041 (-) | True | slc5a10 |
| XM_034300142.1 | mRNA | downstream | 206056 | 1167628 ~ 1190548 (-) | True | LOC113535776 |
| XM_026928797.2 | mRNA | downstream | 283005 | 1052390 ~ 1113599 (-) | True | cacna1hb |
| XM_034299982.1 | mRNA | downstream | 370583 | 987755 ~ 1026021 (-) | True | myo15ab |
| XM_034300032.1 | mRNA | upstream | 115416 | 1512321 ~ 1518371 (-) | False | en1b |
| XM_034300031.1 | mRNA | upstream | 115416 | 1512321 ~ 1518371 (-) | True | en1b |
| XM_034300164.1 | mRNA | upstream | 141548 | 1538453 ~ 1599742 (-) | False | nrp2a |
| XM_034300165.1 | mRNA | upstream | 144457 | 1541362 ~ 1599744 (-) | True | nrp2a |
| XM_034300163.1 | mRNA | upstream | 221915 | 1618820 ~ 1738935 (-) | True | pard3ba |
| TU437448 | other | downstream | 119791 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 480921 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 1169502 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_004577318.1 | other | upstream | 144457 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437816 | other | upstream | 395282 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_003403632.2 | other | upstream | 1169852 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 1446307 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 3060530 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
