Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438165 |
| length | 207 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G369891 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 2510756 ~ 2510962 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577279.1 | lncRNA | downstream | 165223 | 2343113 ~ 2345533 (-) | False | LOC113535806 |
| XR_003403637.2 | lncRNA | downstream | 165223 | 2343113 ~ 2345533 (-) | True | LOC113535806 |
| XR_004577295.1 | lncRNA | downstream | 265598 | 2199025 ~ 2245158 (-) | True | LOC117596129 |
| XR_004577296.1 | lncRNA | downstream | 265598 | 2244126 ~ 2245158 (-) | False | LOC117596129 |
| XR_004577298.1 | lncRNA | downstream | 322814 | 2186646 ~ 2187942 (-) | False | LOC117596130 |
| TU438184 | lncRNA | upstream | 9536 | 2520498 ~ 2522127 (-) | True | G369907 |
| TU438207 | lncRNA | upstream | 45017 | 2555979 ~ 2558765 (-) | True | G369924 |
| TU438209 | lncRNA | upstream | 45017 | 2555979 ~ 2558765 (-) | False | G369924 |
| TU438210 | lncRNA | upstream | 45017 | 2555979 ~ 2558765 (-) | False | G369924 |
| TU438211 | lncRNA | upstream | 45017 | 2555979 ~ 2558809 (-) | False | G369924 |
| XM_026928727.2 | mRNA | downstream | 1617 | 2501030 ~ 2509139 (-) | False | LOC113535442 |
| XM_026929274.2 | mRNA | downstream | 159767 | 2347228 ~ 2350989 (-) | True | LOC113535761 |
| XM_026929032.2 | mRNA | downstream | 179086 | 2282791 ~ 2331670 (-) | True | LOC113535598 |
| XM_034300269.1 | mRNA | downstream | 239103 | 2261289 ~ 2271653 (-) | False | LOC113535651 |
| XM_034300270.1 | mRNA | downstream | 239113 | 2261289 ~ 2271643 (-) | False | LOC113535651 |
| XM_026928963.2 | mRNA | upstream | 12153 | 2523115 ~ 2542866 (-) | True | LOC113535562 |
| XM_026928960.2 | mRNA | upstream | 12153 | 2523115 ~ 2542864 (-) | False | LOC113535562 |
| XM_026928961.2 | mRNA | upstream | 12153 | 2523115 ~ 2542602 (-) | False | LOC113535562 |
| XM_026929206.2 | mRNA | upstream | 55795 | 2566757 ~ 2574471 (-) | True | LOC113535702 |
| XM_026929338.2 | mRNA | upstream | 64488 | 2575450 ~ 2583050 (-) | True | LOC113535812 |
| TU437816 | other | downstream | 715532 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 911012 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 1233943 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 1595073 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 2283654 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_003403632.2 | other | upstream | 55795 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 332250 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 1946473 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 1948355 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 1950247 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
