Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438334 |
| length | 1253 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 4 |
| gene id | G370019 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 2818603 ~ 2821314 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438351 | lncRNA | downstream | 27927 | 2783272 ~ 2790676 (-) | True | G370028 |
| TU438342 | lncRNA | downstream | 28549 | 2771253 ~ 2790054 (-) | False | G370023 |
| TU438346 | lncRNA | downstream | 43208 | 2774882 ~ 2775395 (-) | True | G370024 |
| TU438341 | lncRNA | downstream | 43968 | 2772626 ~ 2774635 (-) | True | G370023 |
| TU438290 | lncRNA | downstream | 124026 | 2694149 ~ 2694577 (-) | True | G369988 |
| XR_004577338.1 | lncRNA | upstream | 25066 | 2846380 ~ 2853211 (-) | False | LOC117596167 |
| XR_004577337.1 | lncRNA | upstream | 25066 | 2846380 ~ 2853208 (-) | False | LOC117596167 |
| TU438470 | lncRNA | upstream | 128107 | 2949421 ~ 2984930 (-) | False | G370127 |
| TU438468 | lncRNA | upstream | 142954 | 2964268 ~ 2984930 (-) | True | G370127 |
| XR_004577320.1 | lncRNA | upstream | 217860 | 3039174 ~ 3052202 (-) | True | LOC117596157 |
| XM_034300419.1 | mRNA | downstream | 6994 | 2808317 ~ 2811609 (-) | True | LOC113535756 |
| XM_026928790.2 | mRNA | downstream | 14474 | 2797268 ~ 2804129 (-) | False | LOC113535480 |
| XM_026928789.2 | mRNA | downstream | 14474 | 2797268 ~ 2804129 (-) | True | LOC113535480 |
| XM_034299928.1 | mRNA | downstream | 47946 | 2768629 ~ 2770657 (-) | True | LOC113535758 |
| XM_026928808.2 | mRNA | downstream | 51110 | 2758969 ~ 2767493 (-) | True | tuba8l2 |
| XM_026928792.2 | mRNA | upstream | 2679 | 2823993 ~ 2827600 (-) | True | LOC113535483 |
| XM_026928791.2 | mRNA | upstream | 12299 | 2833613 ~ 2838789 (-) | True | LOC113535482 |
| XM_034300420.1 | mRNA | upstream | 53594 | 2874908 ~ 2892085 (-) | True | LOC117596192 |
| XM_026928711.2 | mRNA | upstream | 261756 | 3083070 ~ 3170485 (-) | True | gpc5a |
| XM_034299954.1 | mRNA | upstream | 790405 | 3611719 ~ 3618120 (-) | True | LOC113535432 |
| XR_003403632.2 | other | downstream | 244132 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU437816 | other | downstream | 1023379 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 1218859 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 1541790 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 1902920 | 911553 ~ 915683 (-) | True | G369125 |
| TU438365 | other | upstream | 21898 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 1636121 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 1638003 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 1639895 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577367.1 | other | upstream | 1641794 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
