Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU440456 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G371793 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 7183176 ~ 7183386 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU440449 | lncRNA | downstream | 30017 | 7151438 ~ 7153159 (-) | True | G371787 |
| TU440274 | lncRNA | downstream | 281833 | 6891766 ~ 6901343 (-) | True | G371634 |
| TU440265 | lncRNA | downstream | 301396 | 6879870 ~ 6881780 (-) | True | G371625 |
| TU440266 | lncRNA | downstream | 308756 | 6870572 ~ 6874420 (-) | True | pspc1 |
| TU440272 | lncRNA | downstream | 315216 | 6867744 ~ 6867960 (-) | True | G371632 |
| TU440604 | lncRNA | upstream | 173925 | 7357311 ~ 7378538 (-) | False | LOC113537388 |
| TU440608 | lncRNA | upstream | 227595 | 7410981 ~ 7415018 (-) | True | G371929 |
| TU440643 | lncRNA | upstream | 284403 | 7467789 ~ 7468460 (-) | True | G371964 |
| TU440646 | lncRNA | upstream | 292517 | 7475903 ~ 7476105 (-) | True | G371967 |
| TU440605 | lncRNA | upstream | 294494 | 7477880 ~ 7478230 (-) | False | LOC113537388 |
| XM_026931957.2 | mRNA | downstream | 1694 | 7156580 ~ 7181482 (-) | False | sugt1 |
| XM_026931956.2 | mRNA | downstream | 1695 | 7156580 ~ 7181481 (-) | True | sugt1 |
| XM_026932363.2 | mRNA | downstream | 86470 | 7092802 ~ 7096706 (-) | True | pcdh8 |
| XM_026932060.2 | mRNA | downstream | 92646 | 7084926 ~ 7090530 (-) | True | LOC113537541 |
| XM_026932089.2 | mRNA | downstream | 100322 | 7069178 ~ 7082854 (-) | False | si:ch211-91p5.3 |
| XM_026931775.2 | mRNA | upstream | 1416 | 7184802 ~ 7201325 (-) | False | LOC113537349 |
| XM_026931777.2 | mRNA | upstream | 1416 | 7184802 ~ 7195366 (-) | False | LOC113537349 |
| XM_026931779.2 | mRNA | upstream | 1416 | 7184802 ~ 7195266 (-) | False | LOC113537349 |
| XM_026931776.2 | mRNA | upstream | 1416 | 7184802 ~ 7194530 (-) | True | LOC113537349 |
| XM_026931780.2 | mRNA | upstream | 1416 | 7184802 ~ 7191651 (-) | False | LOC113537349 |
| TU440391 | other | downstream | 114645 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| XR_004577289.1 | other | downstream | 114709 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| XR_004577329.1 | other | downstream | 819973 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| XR_004577328.1 | other | downstream | 1149783 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_003403780.2 | other | downstream | 1230863 | 5942429 ~ 5952313 (-) | False | LOC113537623 |
| TU440780 | other | upstream | 534877 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440974 | other | upstream | 729080 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU441267 | other | upstream | 1137598 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU441284 | other | upstream | 1246225 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| XR_004577317.1 | other | upstream | 1408021 | 8591407 ~ 8606840 (-) | True | tsga10 |
