Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026932101.2 |
| length | 1332 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | lipt1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 10871224 ~ 10872556 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006464 | cellular protein modification process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K10105 | LIPT1; lipoyltransferase 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577288.1 | lncRNA | downstream | 74027 | 10676632 ~ 10797197 (-) | True | LOC117596123 |
| XR_004577287.1 | lncRNA | downstream | 76667 | 10676632 ~ 10794557 (-) | False | LOC117596123 |
| TU442685 | lncRNA | downstream | 306300 | 10495636 ~ 10564924 (-) | True | G373762 |
| TU442650 | lncRNA | downstream | 447757 | 10422163 ~ 10423467 (-) | False | cab39l |
| TU442628 | lncRNA | downstream | 578646 | 10290637 ~ 10292578 (-) | True | LOC113537663 |
| TU443009 | lncRNA | upstream | 55911 | 10928467 ~ 10929554 (-) | True | G374040 |
| TU443008 | lncRNA | upstream | 57183 | 10929739 ~ 10933407 (-) | True | G374039 |
| TU443070 | lncRNA | upstream | 195175 | 11067731 ~ 11067952 (-) | True | G374091 |
| TU443072 | lncRNA | upstream | 212086 | 11084642 ~ 11120831 (-) | False | G374093 |
| TU443073 | lncRNA | upstream | 243116 | 11115672 ~ 11120831 (-) | True | G374093 |
| XM_026931840.2 | mRNA | downstream | 1128 | 10850376 ~ 10870096 (-) | True | eif5b |
| XM_026932043.2 | mRNA | downstream | 32263 | 10806435 ~ 10838961 (-) | True | arhgef7b |
| XM_026932044.2 | mRNA | downstream | 32266 | 10806435 ~ 10838958 (-) | False | arhgef7b |
| XM_034299961.1 | mRNA | downstream | 172533 | 10696458 ~ 10698691 (-) | False | sox1b |
| XM_026931732.2 | mRNA | downstream | 172536 | 10696458 ~ 10698688 (-) | True | sox1b |
| XM_026932231.2 | mRNA | upstream | 61589 | 10934145 ~ 10946702 (-) | False | map2k7 |
| XM_034300368.1 | mRNA | upstream | 61589 | 10934145 ~ 10946702 (-) | True | map2k7 |
| XM_026932232.2 | mRNA | upstream | 61589 | 10934145 ~ 10946701 (-) | False | map2k7 |
| XM_034300182.1 | mRNA | upstream | 76522 | 10949078 ~ 10974287 (-) | True | pkn1a |
| XM_034300186.1 | mRNA | upstream | 78585 | 10951141 ~ 10995765 (-) | False | pkn1a |
| TU442201 | other | downstream | 952484 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 2264384 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 2438800 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 2542198 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU440974 | other | downstream | 2954903 | 7912466 ~ 7916321 (-) | False | fam155a |
| trnar-ucu_14 | other | upstream | 600324 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 2436482 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 2451526 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 2452961 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 2453437 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
