Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443094 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G374111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 11147454 ~ 11147673 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443088 | lncRNA | downstream | 7643 | 11139183 ~ 11139811 (-) | True | G374105 |
| TU443072 | lncRNA | downstream | 26623 | 11084642 ~ 11120831 (-) | False | G374093 |
| TU443073 | lncRNA | downstream | 26623 | 11115672 ~ 11120831 (-) | True | G374093 |
| TU443070 | lncRNA | downstream | 79502 | 11067731 ~ 11067952 (-) | True | G374091 |
| TU443008 | lncRNA | downstream | 214047 | 10929739 ~ 10933407 (-) | True | G374039 |
| TU443180 | lncRNA | upstream | 89389 | 11237062 ~ 11237431 (-) | True | G374196 |
| TU443185 | lncRNA | upstream | 90568 | 11238241 ~ 11242837 (-) | True | G374198 |
| TU443184 | lncRNA | upstream | 91044 | 11238717 ~ 11242837 (-) | False | G374198 |
| TU443231 | lncRNA | upstream | 211170 | 11358843 ~ 11360421 (-) | True | G374230 |
| TU443391 | lncRNA | upstream | 446293 | 11593966 ~ 11594981 (-) | True | G374370 |
| XM_026931676.2 | mRNA | downstream | 95342 | 11046759 ~ 11052112 (-) | True | trappc5 |
| XM_026932266.2 | mRNA | downstream | 101389 | 11025293 ~ 11046065 (-) | True | mcoln1a |
| XM_034300386.1 | mRNA | downstream | 127474 | 11004546 ~ 11019980 (-) | False | si:ch211-214c7.4 |
| XM_026931664.2 | mRNA | downstream | 129750 | 11001667 ~ 11017704 (-) | False | si:ch211-214c7.4 |
| XM_034299986.1 | mRNA | upstream | 100136 | 11247809 ~ 11258475 (-) | True | si:ch211-243a20.3 |
| XM_026932104.2 | mRNA | upstream | 127589 | 11275262 ~ 11280128 (-) | False | emp1 |
| XM_026932103.2 | mRNA | upstream | 127589 | 11275262 ~ 11279363 (-) | False | emp1 |
| XM_026932105.2 | mRNA | upstream | 127589 | 11275262 ~ 11279214 (-) | True | emp1 |
| XM_026932121.2 | mRNA | upstream | 155110 | 11302783 ~ 11308486 (-) | False | LOC113537574 |
| TU442843 | other | downstream | 274908 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 1228714 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 2540614 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 2715030 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 2818428 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| trnar-ucu_14 | other | upstream | 325207 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 2161365 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 2176409 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 2177844 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 2178320 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
