Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443474 |
| length | 264 |
| lncRNA type | intronic |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G374442 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 11668993 ~ 11669256 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443394 | lncRNA | downstream | 72754 | 11595192 ~ 11596239 (-) | True | G374371 |
| TU443391 | lncRNA | downstream | 74012 | 11593966 ~ 11594981 (-) | True | G374370 |
| TU443231 | lncRNA | downstream | 308572 | 11358843 ~ 11360421 (-) | True | G374230 |
| TU443185 | lncRNA | downstream | 426156 | 11238241 ~ 11242837 (-) | True | G374198 |
| TU443184 | lncRNA | downstream | 426156 | 11238717 ~ 11242837 (-) | False | G374198 |
| TU443528 | lncRNA | upstream | 83318 | 11752574 ~ 11755115 (-) | True | G374495 |
| TU443718 | lncRNA | upstream | 265278 | 11934534 ~ 11943075 (-) | True | G374657 |
| TU443741 | lncRNA | upstream | 294548 | 11963804 ~ 11964781 (-) | True | G374680 |
| TU443757 | lncRNA | upstream | 409635 | 12078891 ~ 12084032 (-) | True | mzt1 |
| TU443791 | lncRNA | upstream | 423256 | 12092512 ~ 12092736 (-) | True | G374727 |
| XM_026932394.2 | mRNA | downstream | 116271 | 11546974 ~ 11552722 (-) | True | alg11 |
| XM_026931632.2 | mRNA | downstream | 125296 | 11539380 ~ 11543697 (-) | True | spp2 |
| XM_034300268.1 | mRNA | downstream | 197606 | 11467404 ~ 11471387 (-) | False | pld6 |
| XM_034300193.1 | mRNA | upstream | 100590 | 11769846 ~ 11866324 (-) | False | vps8 |
| XM_034300192.1 | mRNA | upstream | 100590 | 11769846 ~ 11866324 (-) | False | vps8 |
| XM_034300191.1 | mRNA | upstream | 100590 | 11769846 ~ 11866324 (-) | False | vps8 |
| XM_034300190.1 | mRNA | upstream | 100590 | 11769846 ~ 11866324 (-) | True | vps8 |
| XM_034299877.1 | mRNA | upstream | 222418 | 11891674 ~ 11937127 (-) | True | igf2bp2b |
| trnar-ucu_14 | other | downstream | 196022 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU442843 | other | downstream | 796447 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 1750253 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 3062153 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 3236569 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU444510 | other | upstream | 1639782 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 1654826 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 1656261 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 1656737 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_18 | other | upstream | 1658796 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
