Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026931655.2 |
| length | 922 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | cldng |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 13476472 ~ 13478258 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016338 | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0042802 | identical protein binding | molecular_function |
| GO:0005198 | structural molecule activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444588 | lncRNA | downstream | 59376 | 13416822 ~ 13417096 (-) | True | G375420 |
| XR_003403790.2 | lncRNA | downstream | 75047 | 13386832 ~ 13401425 (-) | True | LOC113537738 |
| XR_003403791.2 | lncRNA | downstream | 76559 | 13386832 ~ 13399913 (-) | False | LOC113537738 |
| TU444472 | lncRNA | downstream | 204851 | 13267882 ~ 13271621 (-) | False | G375329 |
| TU444471 | lncRNA | downstream | 205267 | 13267882 ~ 13271205 (-) | True | G375329 |
| TU444627 | lncRNA | upstream | 20385 | 13498643 ~ 13505565 (-) | True | G375455 |
| XR_004577351.1 | lncRNA | upstream | 26046 | 13504304 ~ 13507133 (-) | True | LOC117596174 |
| TU444638 | lncRNA | upstream | 42305 | 13520563 ~ 13520923 (-) | True | G375466 |
| XR_004577284.1 | lncRNA | upstream | 350923 | 13829181 ~ 13830571 (-) | True | LOC117596119 |
| TU444799 | lncRNA | upstream | 354210 | 13832468 ~ 13834980 (-) | True | G375614 |
| XM_026931688.2 | mRNA | downstream | 49318 | 13417325 ~ 13427154 (-) | True | creb1a |
| XM_026931689.2 | mRNA | downstream | 49319 | 13417325 ~ 13427153 (-) | False | creb1a |
| XM_026931800.2 | mRNA | downstream | 127638 | 13331029 ~ 13348834 (-) | True | cd99 |
| XM_026931799.2 | mRNA | downstream | 127646 | 13321263 ~ 13348826 (-) | False | cd99 |
| XM_034300020.1 | mRNA | downstream | 155942 | 13309422 ~ 13320530 (-) | False | gyg2 |
| XM_034300257.1 | mRNA | upstream | 389430 | 13867688 ~ 13902247 (-) | True | lmo7b |
| XM_034300254.1 | mRNA | upstream | 389430 | 13867688 ~ 13902245 (-) | False | lmo7b |
| XM_034300256.1 | mRNA | upstream | 389430 | 13867688 ~ 13902245 (-) | False | lmo7b |
| XM_034300255.1 | mRNA | upstream | 389430 | 13867688 ~ 13902245 (-) | False | lmo7b |
| XM_034300253.1 | mRNA | upstream | 389430 | 13867688 ~ 13902245 (-) | False | lmo7b |
| TU444599 | other | downstream | 36937 | 13439219 ~ 13439535 (-) | True | G375428 |
| trnar-ucu_18 | other | downstream | 148329 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
| trnar-ucu_17 | other | downstream | 150388 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_16 | other | downstream | 150864 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_15 | other | downstream | 152299 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| XR_004577357.1 | other | upstream | 504487 | 13982745 ~ 14016085 (-) | False | pibf1 |
| TU445045 | other | upstream | 549036 | 14027294 ~ 14030879 (-) | True | G375826 |
| XR_003403797.2 | other | upstream | 559473 | 14037731 ~ 14037862 (-) | True | LOC113537775 |
| XR_003403796.1 | other | upstream | 560270 | 14038528 ~ 14038598 (-) | True | LOC113537774 |
| XR_003403798.1 | other | upstream | 560596 | 14038854 ~ 14038986 (-) | True | LOC113537776 |
