Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026932151.2 |
| length | 1278 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | cryaa |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 8127561 ~ 8131183 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007601 | visual perception | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| K09541 | CRYAA; crystallin, alpha A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU441040 | lncRNA | downstream | 43022 | 8082963 ~ 8084539 (-) | False | cars2 |
| TU441021 | lncRNA | downstream | 111173 | 8016105 ~ 8016388 (-) | True | G372307 |
| TU441014 | lncRNA | downstream | 138363 | 7988950 ~ 7989198 (-) | True | G372300 |
| TU441002 | lncRNA | downstream | 150570 | 7976777 ~ 7976991 (-) | True | G372288 |
| TU440867 | lncRNA | downstream | 218009 | 7909124 ~ 7909552 (-) | True | G372168 |
| TU441219 | lncRNA | upstream | 71585 | 8202768 ~ 8204224 (-) | True | G372471 |
| TU441222 | lncRNA | upstream | 130252 | 8261435 ~ 8267189 (-) | True | LOC113537489 |
| TU441285 | lncRNA | upstream | 297421 | 8428604 ~ 8444065 (-) | True | G372522 |
| TU441552 | lncRNA | upstream | 643849 | 8775032 ~ 8788141 (-) | True | G372742 |
| XR_003403741.2 | lncRNA | upstream | 832402 | 8963585 ~ 8965621 (-) | False | LOC113537261 |
| XM_026931724.2 | mRNA | downstream | 22209 | 8091366 ~ 8105352 (-) | True | ankrd10a |
| XM_026931725.2 | mRNA | downstream | 37464 | 8087780 ~ 8090097 (-) | True | LOC113537306 |
| XM_026931658.2 | mRNA | downstream | 43076 | 8069402 ~ 8084485 (-) | True | cars2 |
| XM_026931731.2 | mRNA | downstream | 61110 | 8062221 ~ 8066451 (-) | True | LOC113537312 |
| XM_026931738.2 | mRNA | downstream | 73016 | 8042485 ~ 8054545 (-) | True | irs2a |
| XM_026932402.2 | mRNA | upstream | 1804 | 8132987 ~ 8148533 (-) | True | cbsa |
| XM_026932222.2 | mRNA | upstream | 18957 | 8150140 ~ 8157560 (-) | True | u2af1 |
| XM_026931962.2 | mRNA | upstream | 81720 | 8212903 ~ 8218195 (-) | True | rab9a |
| XM_026931961.2 | mRNA | upstream | 87456 | 8218639 ~ 8222543 (-) | True | LOC113537479 |
| XM_026931976.2 | mRNA | upstream | 133815 | 8264998 ~ 8267272 (-) | False | LOC113537489 |
| TU440974 | other | downstream | 211240 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU440780 | other | downstream | 402766 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440391 | other | downstream | 1059030 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| XR_004577289.1 | other | downstream | 1059094 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| XR_004577329.1 | other | downstream | 1764358 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| TU441267 | other | upstream | 189801 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU441284 | other | upstream | 298428 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| XR_004577317.1 | other | upstream | 460224 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU442201 | other | upstream | 1747660 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| TU442843 | other | upstream | 2740101 | 10871284 ~ 10872546 (-) | False | lipt1 |
