Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577364.1 |
| length | 284 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC117596194 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 2115578 ~ 2144451 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437914 | lncRNA | downstream | 94263 | 2018715 ~ 2021315 (-) | True | G369663 |
| TU437910 | lncRNA | downstream | 94263 | 2018918 ~ 2021315 (-) | False | G369663 |
| TU437880 | lncRNA | downstream | 226204 | 1888504 ~ 1889374 (-) | True | G369641 |
| TU437853 | lncRNA | downstream | 260925 | 1854440 ~ 1854653 (-) | True | G369618 |
| TU437849 | lncRNA | downstream | 261796 | 1853349 ~ 1853782 (-) | True | G369617 |
| XR_004577298.1 | lncRNA | upstream | 42195 | 2186646 ~ 2187942 (-) | False | LOC117596130 |
| XR_004577297.1 | lncRNA | upstream | 42195 | 2186646 ~ 2187942 (-) | True | LOC117596130 |
| XR_004577295.1 | lncRNA | upstream | 54574 | 2199025 ~ 2245158 (-) | True | LOC117596129 |
| XR_004577296.1 | lncRNA | upstream | 99675 | 2244126 ~ 2245158 (-) | False | LOC117596129 |
| XR_004577279.1 | lncRNA | upstream | 198662 | 2343113 ~ 2345533 (-) | False | LOC113535806 |
| XM_026929215.2 | mRNA | downstream | 178503 | 1915663 ~ 1937075 (-) | True | klf7a |
| XM_034300370.1 | mRNA | downstream | 206204 | 1895048 ~ 1909374 (-) | False | LOC113535707 |
| XM_034300285.1 | mRNA | upstream | 111970 | 2256421 ~ 2259148 (-) | True | LOC117596168 |
| XM_034300269.1 | mRNA | upstream | 116838 | 2261289 ~ 2271653 (-) | False | LOC113535651 |
| XM_034300270.1 | mRNA | upstream | 116838 | 2261289 ~ 2271643 (-) | False | LOC113535651 |
| XM_034300271.1 | mRNA | upstream | 116838 | 2261289 ~ 2266153 (-) | True | LOC113535651 |
| XM_026929032.2 | mRNA | upstream | 138340 | 2282791 ~ 2331670 (-) | True | LOC113535598 |
| TU437816 | other | downstream | 320354 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 515834 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 838765 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 1199895 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 1888476 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_003403632.2 | other | upstream | 422306 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 698761 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 2312984 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 2314866 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 2316758 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
