Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU481157 |
| length | 709 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G405575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 14076442 ~ 14077150 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU480986 | lncRNA | downstream | 204014 | 13815898 ~ 13872428 (-) | False | G405420 |
| TU480987 | lncRNA | downstream | 206687 | 13815898 ~ 13869755 (-) | False | G405420 |
| TU480988 | lncRNA | downstream | 236609 | 13815898 ~ 13839833 (-) | True | G405420 |
| TU480985 | lncRNA | downstream | 261550 | 13808483 ~ 13814892 (-) | True | G405419 |
| TU480934 | lncRNA | downstream | 340694 | 13735536 ~ 13735748 (-) | True | G405386 |
| XR_004577551.1 | lncRNA | upstream | 106336 | 14183486 ~ 14191755 (-) | True | LOC117596429 |
| TU481288 | lncRNA | upstream | 179374 | 14256524 ~ 14329200 (-) | True | G405681 |
| TU481287 | lncRNA | upstream | 227789 | 14304939 ~ 14329200 (-) | False | G405681 |
| TU481309 | lncRNA | upstream | 236589 | 14313739 ~ 14314834 (-) | True | G405701 |
| TU481315 | lncRNA | upstream | 301742 | 14378892 ~ 14385650 (-) | True | G405707 |
| XM_026928422.2 | mRNA | downstream | 2267 | 14067317 ~ 14074175 (-) | False | ccdc126 |
| XM_034301712.1 | mRNA | downstream | 2267 | 14067317 ~ 14074175 (-) | False | ccdc126 |
| XM_034301713.1 | mRNA | downstream | 2299 | 14067317 ~ 14074143 (-) | True | ccdc126 |
| XM_034301598.1 | mRNA | downstream | 30399 | 14016688 ~ 14046043 (-) | False | igf2bp3 |
| XM_034301597.1 | mRNA | downstream | 30399 | 14016688 ~ 14046043 (-) | True | igf2bp3 |
| XM_026928309.2 | mRNA | upstream | 4222 | 14081372 ~ 14083846 (-) | False | npy |
| XM_034301504.1 | mRNA | upstream | 62794 | 14139944 ~ 14168596 (-) | False | mpp6b |
| XM_034301505.1 | mRNA | upstream | 62794 | 14139944 ~ 14168590 (-) | True | mpp6b |
| XM_026928099.2 | mRNA | upstream | 95684 | 14172834 ~ 14195466 (-) | True | dazl |
| XM_026928095.2 | mRNA | upstream | 118805 | 14195955 ~ 14218170 (-) | False | tbc1d5 |
| TU480965 | other | downstream | 314887 | 13759761 ~ 13761555 (-) | True | s100a11 |
| TU480964 | other | downstream | 314926 | 13759761 ~ 13761516 (-) | False | s100a11 |
| TU480779 | other | downstream | 517822 | 13556156 ~ 13558620 (-) | False | cks1b |
| TU480639 | other | downstream | 683707 | 13389964 ~ 13392735 (-) | False | dpm3 |
| TU480489 | other | downstream | 935327 | 13140694 ~ 13141115 (-) | True | G404999 |
| XR_004577571.1 | other | upstream | 4222 | 14081372 ~ 14083846 (-) | True | npy |
| TU481171 | other | upstream | 37469 | 14114619 ~ 14119658 (-) | True | G405588 |
| trnat-ugu_14 | other | upstream | 466067 | 14543217 ~ 14543289 (-) | True | trnat-ugu_14 |
| trnat-ugu_15 | other | upstream | 468956 | 14546106 ~ 14546178 (-) | True | trnat-ugu_15 |
| TU481617 | other | upstream | 890326 | 14967476 ~ 15013988 (-) | True | G405961 |
