RNA id: AMCG00000247



Basic Information


Item Value
RNA id AMCG00000247
length 285
RNA type mRNA
GC content 0.47
exon number 3
gene id AMCG00000247
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8424584 ~ 8426636 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGTGTGTTGCAGCTGGACATCAGATTGTGGCTTTAGCCAACCTGCGGCCTGCAACAGATAAAGATGAGTTAGACAGCTATATGTATCAGACTGTGGGCCACCAAGCTATCGACCTCTATGCTGAAGCCATGGACCTGCCCCTCTACAGACGAACTATTGAAGGAGCGAGTTTGGAAATTGGAAGAGAGTACTGCAAAAATGAAGGGGATGAAGTTGAGGATCTATATCACTTGCTGAAGCTTGTTAAGGGCATCACCGACATGACCTCTCCTGCTAAATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187484 lncRNA upstream 468195 7955972 ~ 7956389 (+) True G149001
TU187435 lncRNA upstream 664987 7759369 ~ 7759597 (+) True G148961
TU187384 lncRNA upstream 740487 7683878 ~ 7684097 (+) True G148919
TU187283 lncRNA upstream 1100133 7313907 ~ 7324451 (+) True AMCG00000215
TU187229 lncRNA upstream 1332124 7092025 ~ 7092460 (+) True G148791
TU187549 lncRNA downstream 146300 8572936 ~ 8575124 (+) True AMCG00000251
TU187552 lncRNA downstream 157012 8583648 ~ 8584007 (+) True G149055
TU187553 lncRNA downstream 157852 8584488 ~ 8584967 (+) True G149056
TU187556 lncRNA downstream 242344 8668980 ~ 8673786 (+) True G149059
TU187686 lncRNA downstream 586735 9013371 ~ 9016151 (+) True G149172
AMCG00000232 mRNA upstream 304479 8108618 ~ 8120105 (+) True AMCG00000232
AMCG00000238 mRNA upstream 538140 7871530 ~ 7886444 (+) True AMCG00000238
AMCG00000221 mRNA upstream 683777 7702819 ~ 7740807 (+) True AMCG00000221
AMCG00000220 mRNA upstream 727453 7690570 ~ 7697131 (+) True AMCG00000220
AMCG00000235 mRNA upstream 750017 7663322 ~ 7674567 (+) True AMCG00000235
AMCG00000248 mRNA downstream 15667 8442303 ~ 8457288 (+) True AMCG00000248
AMCG00000245 mRNA downstream 46938 8473574 ~ 8483697 (+) True AMCG00000245
AMCG00000250 mRNA downstream 93228 8519864 ~ 8525224 (+) True AMCG00000250
AMCG00000246 mRNA downstream 100802 8527438 ~ 8550859 (+) True AMCG00000246
AMCG00000244 mRNA downstream 140831 8567467 ~ 8569670 (+) True AMCG00000244
TU187300 other upstream 1061877 7359278 ~ 7362707 (+) False AMCG00000217
TU187301 other upstream 1061877 7361020 ~ 7362707 (+) True AMCG00000217
TU187266 other upstream 1127920 7290666 ~ 7296664 (+) False AMCG00000216
TU187550 other downstream 153081 8579717 ~ 8581112 (+) False AMCG00000249
TU188032 other downstream 1542688 9969324 ~ 9970801 (+) True G149424
TU188165 other downstream 2107954 10534590 ~ 10535137 (+) True G149525
TU188404 other downstream 3555824 11982460 ~ 11985715 (+) False AMCG00000352
TU188603 other downstream 4253034 12679670 ~ 12727903 (+) True G149859

Expression Profile