Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000280 |
| length | 1089 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | AMCG00000280 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9557518 ~ 9560476 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0035335 | peptidyl-tyrosine dephosphorylation | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0016301 | kinase activity | molecular_function |
| GO:0004725 | protein tyrosine phosphatase activity | molecular_function |
| id | description |
|---|---|
| K14167 | CDKN3, KAP; cyclin-dependent kinase inhibitor 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU187903 | lncRNA | upstream | 41918 | 9514822 ~ 9515600 (+) | False | AMCG00000286 |
| TU187853 | lncRNA | upstream | 70837 | 9483359 ~ 9486681 (+) | False | AMCG00000285 |
| TU187785 | lncRNA | upstream | 272367 | 9280063 ~ 9285151 (+) | True | G149253 |
| TU187686 | lncRNA | upstream | 541367 | 9013371 ~ 9016151 (+) | True | G149172 |
| TU187556 | lncRNA | upstream | 883732 | 8668980 ~ 8673786 (+) | True | G149059 |
| TU187924 | lncRNA | downstream | 1081 | 9561557 ~ 9573564 (+) | False | AMCG00000281 |
| TU187938 | lncRNA | downstream | 159471 | 9719947 ~ 9776988 (+) | True | G149359 |
| TU188022 | lncRNA | downstream | 397237 | 9957713 ~ 9962571 (+) | True | G149416 |
| TU188017 | lncRNA | downstream | 412572 | 9973048 ~ 9975172 (+) | True | G149415 |
| TU188070 | lncRNA | downstream | 460946 | 10021422 ~ 10021853 (+) | True | G149450 |
| AMCG00000286 | mRNA | upstream | 11107 | 9515369 ~ 9546411 (+) | True | AMCG00000286 |
| AMCG00000288 | mRNA | upstream | 48594 | 9501693 ~ 9508924 (+) | True | AMCG00000288 |
| AMCG00000287 | mRNA | upstream | 56150 | 9487917 ~ 9501368 (+) | True | AMCG00000287 |
| AMCG00000285 | mRNA | upstream | 70829 | 9440061 ~ 9486689 (+) | True | AMCG00000285 |
| AMCG00000277 | mRNA | upstream | 129976 | 9414677 ~ 9427542 (+) | True | AMCG00000277 |
| AMCG00000281 | mRNA | downstream | 12713 | 9573189 ~ 9591088 (+) | True | AMCG00000281 |
| AMCG00000283 | mRNA | downstream | 128271 | 9688747 ~ 9705449 (+) | True | AMCG00000283 |
| AMCG00000282 | mRNA | downstream | 161414 | 9721890 ~ 9747008 (+) | True | AMCG00000282 |
| AMCG00000293 | mRNA | downstream | 267613 | 9828089 ~ 9840429 (+) | True | AMCG00000293 |
| AMCG00000294 | mRNA | downstream | 304511 | 9864987 ~ 9876944 (+) | True | AMCG00000294 |
| TU187550 | other | upstream | 976406 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU187300 | other | upstream | 2194811 | 7359278 ~ 7362707 (+) | False | AMCG00000217 |
| TU187301 | other | upstream | 2194811 | 7361020 ~ 7362707 (+) | True | AMCG00000217 |
| TU187267 | other | upstream | 2260854 | 7290666 ~ 7296664 (+) | True | AMCG00000216 |
| TU188032 | other | downstream | 408848 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU188165 | other | downstream | 974114 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188404 | other | downstream | 2421984 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188603 | other | downstream | 3119194 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188861 | other | downstream | 4130363 | 13690839 ~ 13692589 (+) | True | G150069 |
