RNA id: AMCG00000661



Basic Information


Item Value
RNA id AMCG00000661
length 651
RNA type mRNA
GC content 0.67
exon number 4
gene id AMCG00000661
representative False

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 21526870 ~ 21533538 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGGCGCGGTGGACTCGAGGCTGTCGTTCTCTCCCGCGGTGCCAGGACGATTCAGAGGGCCGCTCGTGAGCTCGTTAACCAACTGACGGACGCCGACCGGATCGTGCCGCTGAGCCGTGAGCTCACCGCCCCGAGCGGCACCACGGCCCGacGCTGCCGAGAACCCCGCCTCCCGGTTCCTCCCCCGTCCGGCTGCTGGGCCCGGCGGAGGGGCCGCCCCGATGTAGTGTCTGAACGGCGCGGGTGGCTCGGGGTGCAGGCCTCTCCTCCGTGTCTCACCTGCGGGTTCAGGGGGCGGGAGGTGCGGCTACACGAACACCTTGGCCAGGGCGTCGGCGCCGGCGCTGGCGATGTACGCCTTGGACGGGTGGAATGCCACGTCATAGATGGACTCGTCCGACTTCTTCCGGTGGGCTGTGATCTCCTGGACGCAGGTCTTGCTGTCAAGGTTCCAGAGCCGGATGGAGCAGTCGTggcctgggggtggggggggggagagagagacgtgaGGAGGCGAGACGAGACGCAGGAGAGCTCTCGGCACTCTGGGGGGGCGTGGGGGTCCGGGCAGAGCTACACTTACTTCCTGACATCAGCGTCGGCTCTGGTCACCGGATTGCTCAACGGCTACAAAAATATCCTCCAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191062 lncRNA upstream 385410 21141186 ~ 21141460 (+) True G151752
TU191011 lncRNA upstream 607470 20918699 ~ 20919400 (+) True G151709
TU191010 lncRNA upstream 608332 20917942 ~ 20918538 (+) True G151708
TU191008 lncRNA upstream 609000 20917150 ~ 20917870 (+) True G151706
TU191004 lncRNA upstream 656459 20870184 ~ 20870411 (+) True G151702
TU191101 lncRNA downstream 5702 21536231 ~ 21542398 (+) True G151782
TU191090 lncRNA downstream 28321 21558850 ~ 21567174 (+) True G151775
TU191123 lncRNA downstream 65309 21595838 ~ 21598156 (+) True G151804
AMCG00000659 mRNA upstream 392 21516642 ~ 21526478 (+) True AMCG00000659
AMCG00000658 mRNA upstream 12548 21509374 ~ 21514322 (+) True AMCG00000658
AMCG00000657 mRNA upstream 19680 21477919 ~ 21507190 (+) True AMCG00000657
AMCG00000649 mRNA upstream 49452 21469843 ~ 21477418 (+) True AMCG00000649
AMCG00000641 mRNA upstream 286940 21238713 ~ 21239930 (+) True AMCG00000641
AMCG00000660 mRNA downstream 27984 21558513 ~ 21565648 (+) True AMCG00000660
AMCG00000671 mRNA downstream 106221 21636750 ~ 21650005 (+) True AMCG00000671
AMCG00000662 mRNA downstream 153086 21683615 ~ 21687385 (+) True AMCG00000662
AMCG00000665 mRNA downstream 157586 21688115 ~ 21701292 (+) True AMCG00000665
AMCG00000664 mRNA downstream 181161 21711690 ~ 21716183 (+) True AMCG00000664
TU190974 other upstream 683407 20841938 ~ 20843463 (+) True G151676
TU190785 other upstream 1554855 19969339 ~ 19972015 (+) True G151522
TU190212 other upstream 2961243 18542377 ~ 18565627 (+) True AMCG00000572
TU190161 other upstream 3107399 18417180 ~ 18419471 (+) False AMCG00000550
TU190029 other upstream 3367549 18153864 ~ 18159321 (+) True G150976

Expression Profile