Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU188614 |
| length | 1011 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G149869 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12833539 ~ 12841673 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188432 | lncRNA | upstream | 735167 | 12092387 ~ 12098372 (+) | True | G149747 |
| TU188424 | lncRNA | upstream | 806096 | 12027227 ~ 12027443 (+) | True | G149739 |
| TU188352 | lncRNA | upstream | 1032799 | 11800000 ~ 11800740 (+) | True | G149674 |
| TU188351 | lncRNA | upstream | 1033661 | 11799561 ~ 11799878 (+) | True | G149673 |
| TU188350 | lncRNA | upstream | 1035532 | 11797375 ~ 11798007 (+) | True | G149672 |
| TU188779 | lncRNA | downstream | 125302 | 12966975 ~ 12968142 (+) | False | AMCG00000381 |
| TU188827 | lncRNA | downstream | 571192 | 13412865 ~ 13413064 (+) | True | G150042 |
| TU188855 | lncRNA | downstream | 807730 | 13649403 ~ 13650051 (+) | True | G150066 |
| TU188905 | lncRNA | downstream | 898103 | 13739776 ~ 13746116 (+) | True | G150106 |
| TU189157 | lncRNA | downstream | 1623219 | 14464892 ~ 14465302 (+) | True | G150303 |
| AMCG00000376 | mRNA | upstream | 8581 | 12790380 ~ 12824958 (+) | True | AMCG00000376 |
| AMCG00000377 | mRNA | upstream | 49303 | 12764272 ~ 12784236 (+) | True | AMCG00000377 |
| AMCG00000380 | mRNA | upstream | 83175 | 12737655 ~ 12750364 (+) | True | AMCG00000380 |
| AMCG00000366 | mRNA | upstream | 124101 | 12708779 ~ 12709438 (+) | True | AMCG00000366 |
| AMCG00000365 | mRNA | upstream | 254300 | 12572971 ~ 12579239 (+) | True | AMCG00000365 |
| AMCG00000368 | mRNA | downstream | 36765 | 12878438 ~ 12884325 (+) | True | AMCG00000368 |
| AMCG00000369 | mRNA | downstream | 56469 | 12898142 ~ 12920131 (+) | True | AMCG00000369 |
| AMCG00000370 | mRNA | downstream | 90938 | 12932611 ~ 12942366 (+) | True | AMCG00000370 |
| AMCG00000367 | mRNA | downstream | 101383 | 12943056 ~ 12948495 (+) | True | AMCG00000367 |
| AMCG00000381 | mRNA | downstream | 125204 | 12966877 ~ 13030853 (+) | True | AMCG00000381 |
| TU188603 | other | upstream | 105636 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188404 | other | upstream | 847824 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188165 | other | upstream | 2298402 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188032 | other | upstream | 2862738 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU187550 | other | upstream | 4252427 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU188861 | other | downstream | 849166 | 13690839 ~ 13692589 (+) | True | G150069 |
| TU189044 | other | downstream | 1291465 | 14133138 ~ 14153840 (+) | True | AMCG00000412 |
| TU189714 | other | downstream | 4094320 | 16935993 ~ 16938282 (+) | True | G150750 |
| TU189794 | other | downstream | 4703781 | 17545454 ~ 17548508 (+) | True | G150811 |
| TU190029 | other | downstream | 5312191 | 18153864 ~ 18159321 (+) | True | G150976 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | TU176856 | True | 4154 | lncRNA | 0.42 | 2 | CI01000029 | 8731853 ~ 8736093 (+) |
| rainbow trout (Oncorhynchus mykiss) | TU209437 | True | 2065 | lncRNA | 0.42 | 2 | NC_048566.1 | 75254691 ~ 75256783 (-) |
| tiger barb (Puntius tetrazona) | TU209437 | True | 1480 | lncRNA | 0.46 | 2 | NC_056718.1 | 25609303 ~ 25611845 (+) |
