RNA id: TU190511



Basic Information


Item Value
RNA id TU190511
length 266
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G151310
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 19130625 ~ 19130890 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTCGGTATCCAGAACCCCAGACTTGGCCTCATCGAGAAAGTGGACAGACGCCTACTGGTCTCTTCCTGTCTCGGTGGCTGCTCCGTGGGTTGGGACTGAAGaaagtgaagagagagagagacagaaagaggaaGAAGGGCACCCACAGTACCTGTTCGACAGGCAGTGTCACTGAGCTCAGAGAGGTGTGACATCATCGCACGCATCACCCAAGCTTATCGGCAAACCCAGGTGCTGCTTCGTCCcgcaggaggaggagaagacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU190367 lncRNA upstream 209259 18919921 ~ 18921366 (+) True G151226
TU190357 lncRNA upstream 262581 18863024 ~ 18868044 (+) True G151219
TU190355 lncRNA upstream 271161 18859263 ~ 18859464 (+) True G151217
TU190202 lncRNA upstream 599868 18489851 ~ 18530757 (+) True AMCG00000573
TU190136 lncRNA upstream 745579 18384600 ~ 18385046 (+) True G151052
TU190549 lncRNA downstream 174356 19305246 ~ 19307462 (+) True G151339
TU190812 lncRNA downstream 918526 20049416 ~ 20049648 (+) True G151535
TU190815 lncRNA downstream 985608 20116498 ~ 20116788 (+) True G151538
TU190817 lncRNA downstream 1022225 20153115 ~ 20153540 (+) True G151540
TU190834 lncRNA downstream 1408182 20539072 ~ 20540211 (+) False G151557
AMCG00000595 mRNA upstream 139308 18950158 ~ 18991317 (+) True AMCG00000595
AMCG00000596 mRNA upstream 183159 18928666 ~ 18947466 (+) True AMCG00000596
AMCG00000594 mRNA upstream 207600 18886448 ~ 18923025 (+) True AMCG00000594
AMCG00000587 mRNA upstream 305947 18808614 ~ 18824678 (+) True AMCG00000587
AMCG00000569 mRNA upstream 440530 18678797 ~ 18690095 (+) True AMCG00000569
AMCG00000593 mRNA downstream 156283 19287173 ~ 19289424 (+) True AMCG00000593
AMCG00000605 mRNA downstream 252042 19382932 ~ 19387617 (+) True AMCG00000605
AMCG00000604 mRNA downstream 260884 19391774 ~ 19409778 (+) True AMCG00000604
AMCG00000606 mRNA downstream 288898 19419788 ~ 19444709 (+) True AMCG00000606
AMCG00000610 mRNA downstream 336577 19467467 ~ 19470302 (+) True AMCG00000610
TU190212 other upstream 564998 18542377 ~ 18565627 (+) True AMCG00000572
TU190161 other upstream 711154 18417180 ~ 18419471 (+) False AMCG00000550
TU190029 other upstream 971304 18153864 ~ 18159321 (+) True G150976
TU189794 other upstream 1582117 17545454 ~ 17548508 (+) True G150811
TU189714 other upstream 2192343 16935993 ~ 16938282 (+) True G150750
TU190785 other downstream 838449 19969339 ~ 19972015 (+) True G151522
TU190974 other downstream 1711048 20841938 ~ 20843463 (+) True G151676

Expression Profile