RNA id: TU191101



Basic Information


Item Value
RNA id TU191101
length 677
lncRNA type inter_gene
GC content 0.54
exon number 4
gene id G151782
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 21536231 ~ 21542398 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGCAGTTCTGAGGCGATAGACACAGTTGGGGGGGAAACTGCTGGAGTCAGGGTTGCTGTGGCGAATCTGGAGTACTTACATCATAGCTGTAGTCCGCGTCGTTCGAAACAGTCAGGTCTGCCAAGTCTCCCAGACCCAGCACGCTCTCCAAGACGTCATCAGAGCCCATAATAAAGGACTTGCCGCCGCCAGATGGAAATGTTAAAGGCTcagCCCATTCTGTTCCGTCCCCTGAACTACGGGCCTCCCCGGCGCCCTCCCCGTCCTCCGCCGTCACGAGGAAGTCGAATTCCTTCAGGGCCTCTTCGGTGTCGGGGTCGTCCGGAAGGTCTGCCGCCAGTCCCTCATTACCGATcttgattttgtgtttcttgtttattCTGTGCGTCTCCTTGCCGTCCGTGATGTCATCTACCAGGTCCCCCTCCTCTTCGTCCTCTTCGTCACTGTCATCTGCGTTTTCTAAGAAGTTAAACGTTTCCAGAACATCGCCTGGATTCCTTTTTACATCCTGTCCCTTTTGTTTGGCCGGAGACTCTCCCCCATTGAGGATCTGCTCCAGGTTCTTGGTCTCTACGGAGCCATTCTGCTCAGAGCCCGACAACCCCAGCAAAGAGCGCACCCTCTGAGACCGCACGTCTAGTATTGTGTCTGTATAACCTACTTCCTGAAGATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191097 lncRNA upstream 2693 21529398 ~ 21533538 (+) True AMCG00000661
TU191091 lncRNA upstream 6853 21487732 ~ 21529378 (+) False G151775
TU191062 lncRNA upstream 394771 21141186 ~ 21141460 (+) True G151752
TU191011 lncRNA upstream 616831 20918699 ~ 20919400 (+) True G151709
TU191010 lncRNA upstream 617693 20917942 ~ 20918538 (+) True G151708
TU191090 lncRNA downstream 16452 21558850 ~ 21567174 (+) True G151775
TU191123 lncRNA downstream 53440 21595838 ~ 21598156 (+) True G151804
AMCG00000661 mRNA upstream 5702 21526870 ~ 21530529 (+) False AMCG00000661
AMCG00000659 mRNA upstream 9753 21516642 ~ 21526478 (+) True AMCG00000659
AMCG00000658 mRNA upstream 21909 21509374 ~ 21514322 (+) True AMCG00000658
AMCG00000657 mRNA upstream 29041 21477919 ~ 21507190 (+) True AMCG00000657
AMCG00000649 mRNA upstream 58813 21469843 ~ 21477418 (+) True AMCG00000649
AMCG00000660 mRNA downstream 16115 21558513 ~ 21565648 (+) True AMCG00000660
AMCG00000671 mRNA downstream 94352 21636750 ~ 21650005 (+) True AMCG00000671
AMCG00000662 mRNA downstream 141217 21683615 ~ 21687385 (+) True AMCG00000662
AMCG00000665 mRNA downstream 145717 21688115 ~ 21701292 (+) True AMCG00000665
AMCG00000664 mRNA downstream 169292 21711690 ~ 21716183 (+) True AMCG00000664
TU190974 other upstream 692768 20841938 ~ 20843463 (+) True G151676
TU190785 other upstream 1564216 19969339 ~ 19972015 (+) True G151522
TU190212 other upstream 2970604 18542377 ~ 18565627 (+) True AMCG00000572
TU190161 other upstream 3116760 18417180 ~ 18419471 (+) False AMCG00000550
TU190029 other upstream 3376910 18153864 ~ 18159321 (+) True G150976

Expression Profile