RNA id: AMCG00000695


Basic Information

Item Value
RNA id AMCG00000695
length 240
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00000695
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 414444 ~ 414795 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCCTCAGGCTCATTACAGACGGGGACATCGACCTGGTGGTGAACCTGCCCAACAACAACACCATGTTCATCAAGGACAACTTCCTGATCCGCAGGATGGCCATCGACCACGGGGTGCCCCTCATCACCAACTTCCAGGTTGTGAACCTGTTTGCCGAGGCCATCAAGCACTCCGGCAAACTGGACGCCACCAGCCTCTTCCACTACCGCCAGCAGGACACCAGCCAGCAAGGCTAG

Function

GO:

id name namespace
GO:0070409 carbamoyl phosphate biosynthetic process biological_process
GO:0006543 glutamine catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157380 lncRNA upstream 10853 339640 ~ 403591 (+) False G125561
TU157384 lncRNA upstream 58715 354488 ~ 355729 (+) True G125565
TU157379 lncRNA upstream 72673 339640 ~ 341771 (+) True G125561
TU157309 lncRNA upstream 285317 128859 ~ 129127 (+) True G125516
TU157299 lncRNA upstream 297142 116111 ~ 117302 (+) True G125510
TU157423 lncRNA downstream 41707 456502 ~ 487203 (+) True G125597
TU157432 lncRNA downstream 115104 529899 ~ 531912 (+) True G125605
TU157439 lncRNA downstream 160495 575290 ~ 575492 (+) True G125612
TU157440 lncRNA downstream 181992 596787 ~ 597135 (+) True G125613
TU157522 lncRNA downstream 889300 1304095 ~ 1307335 (+) True G125684
AMCG00000694 mRNA upstream 16 367576 ~ 414428 (+) True AMCG00000694
AMCG00000683 mRNA upstream 270549 138105 ~ 143895 (+) True AMCG00000683
AMCG00000681 mRNA upstream 373848 38752 ~ 40596 (+) True AMCG00000681
AMCG00000680 mRNA upstream 388163 21907 ~ 26281 (+) True AMCG00000680
AMCG00000702 mRNA downstream 697086 1111881 ~ 1133185 (+) True AMCG00000702
AMCG00000705 mRNA downstream 811522 1226317 ~ 1233934 (+) True AMCG00000705
AMCG00000708 mRNA downstream 833946 1248741 ~ 1249425 (+) True AMCG00000708
AMCG00000704 mRNA downstream 841986 1256781 ~ 1272965 (+) True AMCG00000704
AMCG00000715 mRNA downstream 980601 1395396 ~ 1395970 (+) True AMCG00000715
TU157377 other upstream 72673 339640 ~ 341771 (+) False G125561
TU157655 other downstream 1184901 1599696 ~ 1600639 (+) False AMCG00000723
TU157662 other downstream 1254050 1668845 ~ 1696247 (+) True AMCG00000729
TU159397 other downstream 8202404 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 9733062 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 11584869 11999664 ~ 12011425 (+) True AMCG00001002

Expression Profile