RNA id: AMCG00000908


Basic Information

Item Value
RNA id AMCG00000908
length 423
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00000908
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8182377 ~ 8184025 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGTCCACAGGGAGTGAAAAGGGCAGTCACCCCGATGGTTTTGTCTCGGATATCGATGAATTGGAGAGTGGCAGCGAGAGCTCGGACAAGTCCACCAGTGGCTGCAGCCAACTCGACGGCAAAGGGAAACGGAAAAGGAAGACGAGGCTGGCAGGCGTTAGTAAGCAACGGCAGGCTGCGAACGCACGTGAAAGGGACCGAACCCACAGCGTCAACACGGCCTTCACCGCACTTCGGACTCTTATTCCAACGGAGCCTGCCGACCGAAAGCTTTCCAAGATAGAGACATTGCGTCTAGCTTCGAGTTACATCTCTCATCTGGCTAATATCCTGCTCTTAGGAGAAGACTGCCTGGATGGACAACCGTGTATAAAATACCAAGCCATCCTTCAAAGCGCCTCTAATATAAGCCTCGACTGA

Function

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159285 lncRNA upstream 536657 7629902 ~ 7645720 (+) False G127038
TU159286 lncRNA upstream 536657 7629902 ~ 7645720 (+) False G127038
TU159287 lncRNA upstream 536657 7629902 ~ 7645720 (+) True G127038
TU159276 lncRNA upstream 568521 7609617 ~ 7613856 (+) True G127033
TU159218 lncRNA upstream 928235 7231353 ~ 7254142 (+) True G126982
TU159352 lncRNA downstream 104764 8288789 ~ 8289806 (+) True G127091
TU159357 lncRNA downstream 110493 8294518 ~ 8294873 (+) True G127096
TU159408 lncRNA downstream 454571 8638596 ~ 8639823 (+) True G127144
TU159484 lncRNA downstream 897302 9081327 ~ 9082881 (+) True G127206
TU159589 lncRNA downstream 1179082 9363107 ~ 9377589 (+) True G127278
AMCG00000906 mRNA upstream 18391 8112982 ~ 8163986 (+) True AMCG00000906
AMCG00000894 mRNA upstream 121170 7977159 ~ 8061207 (+) True AMCG00000894
AMCG00000895 mRNA upstream 206324 7957849 ~ 7976053 (+) True AMCG00000895
AMCG00000893 mRNA upstream 239971 7860066 ~ 7942406 (+) True AMCG00000893
AMCG00000892 mRNA upstream 340865 7827672 ~ 7841512 (+) True AMCG00000892
AMCG00000907 mRNA downstream 390815 8574840 ~ 8575310 (+) True AMCG00000907
AMCG00000903 mRNA downstream 406643 8590668 ~ 8608633 (+) True AMCG00000903
AMCG00000904 mRNA downstream 425575 8609600 ~ 8616534 (+) True AMCG00000904
AMCG00000905 mRNA downstream 444556 8628581 ~ 8635880 (+) True AMCG00000905
AMCG00000910 mRNA downstream 457649 8641674 ~ 8645197 (+) True AMCG00000910
TU157662 other upstream 6486130 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 6581738 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 7840606 339640 ~ 341771 (+) False G125561
TU159397 other downstream 433174 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 1963832 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 3815639 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 6985886 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 7225087 15409112 ~ 15420880 (+) False G128823

Expression Profile