RNA id: AMCG00000910



Basic Information


Item Value
RNA id AMCG00000910
length 1032
RNA type mRNA
GC content 0.43
exon number 8
gene id AMCG00000910
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8641674 ~ 8645197 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTAAAGGAGTTACAACACTGCCTGTTTGCAGATTCCCTGGTGACCATTTCAGATACTGGAAGAGAACTTGGAGAGTTCACTGTTACTATACAGAAAGCCAGCTTTAACAATGAGGCTTGCTATCTAATTCATGCTAACAGCCATGGGTCTATTGATGACATACCTTGTGGAACATCCATCACAGCTTACGTATCAAAGAGCCTTGAAACTTTGGAGCAACATCATCATGAATATGTGAAGCTTCAGGACCACCCATTGGACAGGAAGTCATACATGGTCAGACAGGATGACCATTTGGTGGTAAACAAAATTATTACAGAAAGAGAGgaaGTGAAGAGACAGTCATTCACATTTCCCTTAAGCTCCGTTCAGGGATTTGTGTCAGAAGCTTCCAATCTGCTTATTTTACGAATCCTTGCCAAAAAAAGGGCCATTCCAGAGGATATGGTGTTCCTCTCATTTGACACAGAGACTCACATCTGTACGTCTACTTATAAAGAGCTTGGTGTCCGAAGCCAGACTGTTGGAAAGGTGGGGACTGAGGTGTTTGGAATTGAAAGAGCGATTCACTCAGAAGAGGATGTCCCCACTACATGGCAATGCTACTTTCTCTCTGACGGgCATTTAGCGAGCAGAGTGCAGGTTGGATCCCCAGTAACAATGAAGCTCATTCATATGCCTGCTCAGTCAGATGAAgAGCAAAGTAAAGGTCTGatattgatgtttgttttagacAAGAAAGAGCCTGACCTTGTATTTGAGCAGAAACCATTGGTCTGGGAGGATGACATGCAGTTATATTCGAAATTTCTTGACCGGAAGGAAGAGCTGAAAGCAAATCACACGATGTACATTAGACACCATCCCGAACTCAAAGCCTTAATGGCAGATTTCCTTCAGTTCCTACTTCTAAGGAAACCAGATGATGTTTTCACATTTGCTGCTGAGTATTTTGCTCCATTTTCTTCTAAGAGGAATCCAGGAAACACATTTAAGTCTTCAAACAAAACCAACCCATTCTGGGAGAACTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU159408 lncRNA upstream 1851 8638596 ~ 8639823 (+) True G127144
TU159357 lncRNA upstream 346801 8294518 ~ 8294873 (+) True G127096
TU159352 lncRNA upstream 351868 8288789 ~ 8289806 (+) True G127091
TU159285 lncRNA upstream 995954 7629902 ~ 7645720 (+) False G127038
TU159484 lncRNA downstream 436130 9081327 ~ 9082881 (+) True G127206
TU159589 lncRNA downstream 717910 9363107 ~ 9377589 (+) True G127278
TU159869 lncRNA downstream 1797796 10442993 ~ 10444937 (+) True G127509
TU160196 lncRNA downstream 3026571 11671768 ~ 11742750 (+) True G127774
TU160371 lncRNA downstream 3448944 12094141 ~ 12096863 (+) True G127924
AMCG00000905 mRNA upstream 5794 8628581 ~ 8635880 (+) True AMCG00000905
AMCG00000904 mRNA upstream 25140 8609600 ~ 8616534 (+) True AMCG00000904
AMCG00000903 mRNA upstream 33041 8590668 ~ 8608633 (+) True AMCG00000903
AMCG00000907 mRNA upstream 66364 8574840 ~ 8575310 (+) True AMCG00000907
AMCG00000908 mRNA upstream 457649 8182377 ~ 8184025 (+) True AMCG00000908
AMCG00000913 mRNA downstream 1456 8646653 ~ 8652047 (+) True AMCG00000913
AMCG00000911 mRNA downstream 153389 8798586 ~ 8799621 (+) True AMCG00000911
AMCG00000912 mRNA downstream 224767 8869964 ~ 8880928 (+) True AMCG00000912
AMCG00000919 mRNA downstream 273555 8918752 ~ 8929267 (+) True AMCG00000919
AMCG00000918 mRNA downstream 298645 8943842 ~ 8960784 (+) True AMCG00000918
TU159397 other upstream 21479 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 6945427 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 7041035 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 8299903 339640 ~ 341771 (+) False G125561
TU159756 other downstream 1502660 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 3354467 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 6524714 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 6763915 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 9377863 18023060 ~ 18044251 (+) True G129365

Expression Profile