RNA id: AMCG00001313



Basic Information


Item Value
RNA id AMCG00001313
length 282
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00001313
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24447621 ~ 24455129 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCCAGACAGTGGCGGAGGCTGCTGCTTTATAGCACCAGAAGAGCTGCAGAGCTAGGCAACCAGCTTGTGTTGTTGGTCCACAAAGACAGCACGGGGGACGTGCTTGCCTGCCCCTGTCTCACTGAAGAAGGTGTTGAAGGAGTCGTCCCCTCCTCCGATGGTCTTGTCACTGGGCATCTGACCATCAGGCTGGATCCCGTGCTCCAGACAGTACAACTCCCAGCAGGCATTGCCCATCTGGACTCCGGCTTGGCCGACATGGATGGAGATACACTCTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163703 lncRNA upstream 10604 24424565 ~ 24437017 (+) True AMCG00001312
TU163619 lncRNA upstream 327160 24052822 ~ 24120461 (+) True G130552
TU163590 lncRNA upstream 521610 23924878 ~ 23926011 (+) True G130530
TU163591 lncRNA upstream 523744 23923211 ~ 23923877 (+) True G130531
TU163544 lncRNA upstream 591505 23855720 ~ 23856116 (+) True G130492
TU163746 lncRNA downstream 295990 24751119 ~ 24751414 (+) True G130648
TU163787 lncRNA downstream 567550 25022679 ~ 25023049 (+) True G130684
TU163792 lncRNA downstream 601492 25056621 ~ 25056978 (+) True G130689
TU163795 lncRNA downstream 631532 25086661 ~ 25086898 (+) True G130692
TU163798 lncRNA downstream 668465 25123594 ~ 25126079 (+) True G130695
AMCG00001312 mRNA upstream 1388 24436490 ~ 24446233 (+) False AMCG00001312
AMCG00001302 mRNA upstream 95974 24322671 ~ 24351647 (+) True AMCG00001302
AMCG00001309 mRNA upstream 160986 24256836 ~ 24286635 (+) True AMCG00001309
AMCG00001299 mRNA upstream 240000 24180250 ~ 24207621 (+) True AMCG00001299
AMCG00001297 mRNA upstream 356772 24072429 ~ 24090849 (+) True AMCG00001297
AMCG00001311 mRNA downstream 25840 24480969 ~ 24490636 (+) True AMCG00001311
AMCG00001310 mRNA downstream 41529 24496658 ~ 24502375 (+) True AMCG00001310
AMCG00001314 mRNA downstream 113236 24568365 ~ 24576371 (+) True AMCG00001314
AMCG00001315 mRNA downstream 132209 24587338 ~ 24606472 (+) True AMCG00001315
AMCG00001317 mRNA downstream 190723 24645852 ~ 24659929 (+) True AMCG00001317
TU163362 other upstream 1280965 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 3170742 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 3368751 21077135 ~ 21078870 (+) True G129877
TU162800 other upstream 3505224 20942072 ~ 20942397 (+) True G129843
TU162792 other upstream 3522381 20918558 ~ 20925240 (+) True AMCG00001241
TU163730 other downstream 129050 24584179 ~ 24591475 (+) False AMCG00001315
TU164194 other downstream 2401470 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 2496779 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile