RNA id: AMCG00001319



Basic Information


Item Value
RNA id AMCG00001319
length 591
RNA type mRNA
GC content 0.51
exon number 7
gene id AMCG00001319
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24702643 ~ 24861705 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCGTGGAGGTGATCAGTAGTGTCCCACAGTCAGTGGAGCCTCCCCGGGCAGTGGAGTCTGGTGGAGGAGGATCTCAGTCTCAGATCACCGCTGCAGCGCGATCTCCTCGCCAATGCAGTTCTGCTGCGGAAGATAGTGGTGAATCGGacagagcaggagagggagaggtgacgGACGGCTCGCAGGGGGAGATGGAAGACAGTAGTGAGATTTTCTTGATTAAAGAGTTCCAAAAGTCAGAAAGTAGTGATGAAGACATAGATGATGATGtatcaagTAACAGCCTACATCCCAGGAAGGAAGGGTTCCAACACCAAGACACTGTAGAGTATGAATTGCCAGCAAGAAAAGGTGTGAAGAGGCAGTGGAGTGTGGAGGAAAAGAATGCTGTTAATATGCACCTGGCCAAGTTCATGGCACTCAGAAAGACAACCGAGAAGtgcatgctgggagtgtgTGGAGTGAATGGTGCCATGGAAGAGCTCAGGCCTGAAGGACTTCTTACTGAAGAGAGGAGAACTGGAAAGGACTCGGCCAGCAGTGACCTGCAGGGAGCGCTGAGGGTCAGAGGGACAGaaTTATTTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163703 lncRNA upstream 265626 24424565 ~ 24437017 (+) True AMCG00001312
TU163619 lncRNA upstream 582182 24052822 ~ 24120461 (+) True G130552
TU163590 lncRNA upstream 776632 23924878 ~ 23926011 (+) True G130530
TU163591 lncRNA upstream 778766 23923211 ~ 23923877 (+) True G130531
TU163544 lncRNA upstream 846527 23855720 ~ 23856116 (+) True G130492
TU163787 lncRNA downstream 160974 25022679 ~ 25023049 (+) True G130684
TU163792 lncRNA downstream 194916 25056621 ~ 25056978 (+) True G130689
TU163795 lncRNA downstream 224956 25086661 ~ 25086898 (+) True G130692
TU163798 lncRNA downstream 261889 25123594 ~ 25126079 (+) True G130695
TU163808 lncRNA downstream 334677 25196382 ~ 25196991 (+) True G130705
AMCG00001317 mRNA upstream 42714 24645852 ~ 24659929 (+) True AMCG00001317
AMCG00001315 mRNA upstream 96171 24587338 ~ 24606472 (+) True AMCG00001315
AMCG00001314 mRNA upstream 126272 24568365 ~ 24576371 (+) True AMCG00001314
AMCG00001310 mRNA upstream 200268 24496658 ~ 24502375 (+) True AMCG00001310
AMCG00001311 mRNA upstream 212007 24480969 ~ 24490636 (+) True AMCG00001311
AMCG00001322 mRNA downstream 168198 25029903 ~ 25044812 (+) True AMCG00001322
AMCG00001324 mRNA downstream 257931 25119636 ~ 25146056 (+) True AMCG00001324
AMCG00001329 mRNA downstream 288592 25150297 ~ 25150756 (+) True AMCG00001329
AMCG00001330 mRNA downstream 289059 25150764 ~ 25164833 (+) True AMCG00001330
AMCG00001325 mRNA downstream 384671 25246376 ~ 25296858 (+) True AMCG00001325
TU163730 other upstream 111168 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 248258 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 1535987 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 3425764 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 3623773 21077135 ~ 21078870 (+) True G129877
TU164194 other downstream 1994894 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 2090203 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile