RNA id: TU164194


Basic Information

Item Value
RNA id TU164194
length 601
RNA type TUCP
GC content 0.38
exon number 4
gene id AMCG00001361
representative False

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26856599 ~ 26880797 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGAAACTAGTTACAGCTGTACAAGAATCTGATTCAGCACCTGCTTCTTTTcttgaataaactgaaaataataataatggttacATACAAAGTGACAGTAACTACTGGTGATTTCCTTTATTGTGACACATATGATGATGTCTATATAACTTTATGTGGAGCAGAAggcaaaagcaaaaaagaacACCTGGTCAATTGTGGAAGGAATTTTGCAACAGGCCAAACAAGTACATACACAGTGAAATCATCACAATATCTGGGTGATATTCTGATGATCATCCTGCAGAAGAAGCAATTTATGAACCTATCAAATACCAGCTGGTTCTGCACTGAGGTGGTTGtgaaagatgaaaatgaaaaaacataccACTTCCCCTGTTACTGTTGGATCACAGGCTCTTACCCTGTCAGTGTGAGAGAAGGAacagCAAAGAAGAGACATGAGGACAAGCTTCCTAAAAACACGAAGGATCAGATGGAGAACCGCAGGGCCTTATTCATTTTCAGGATAAATAAATTTTATGGCCTTTCTGAATGTCATGACTCATGGTCGAGTATGAAGAATATGAAAAAAGTCCTCAAATTCAAGTCAACTAATAATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164189 lncRNA upstream 63046 26793271 ~ 26793553 (+) True G131021
TU164185 lncRNA upstream 85438 26770880 ~ 26771161 (+) True G131017
TU164097 lncRNA upstream 521309 26296707 ~ 26335290 (+) True G130948
TU164023 lncRNA upstream 793906 26061148 ~ 26062693 (+) True G130884
TU163974 lncRNA upstream 1107098 25735555 ~ 25749501 (+) False AMCG00001337
TU164243 lncRNA downstream 115643 26978775 ~ 26980289 (+) True G131072
AMCG00001363 mRNA upstream 18334 26836487 ~ 26838265 (+) True AMCG00001363
AMCG00001360 mRNA upstream 311090 26537952 ~ 26545509 (+) True AMCG00001360
AMCG00001357 mRNA upstream 337314 26511557 ~ 26519285 (+) True AMCG00001357
AMCG00001356 mRNA upstream 367608 26481391 ~ 26488991 (+) True AMCG00001356
AMCG00001355 mRNA upstream 403269 26445081 ~ 26453330 (+) True AMCG00001355
AMCG00001365 mRNA downstream 41231 26904363 ~ 26954291 (+) False AMCG00001365
AMCG00001364 mRNA downstream 141513 27004645 ~ 27042352 (+) True AMCG00001364
TU163730 other upstream 2265124 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 2402214 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 3689943 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 5579720 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 5777729 21077135 ~ 21078870 (+) True G129877
TU164234 other downstream 88776 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile