RNA id: AMCG00001364


Basic Information

Item Value
RNA id AMCG00001364
length 4346
RNA type mRNA
GC content 0.47
exon number 11
gene id AMCG00001364
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 27004645 ~ 27042352 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAACTTCGTAATTATTGCCAACTGTTTAACGTATGTAGCCTATACGTATAGACAGTGATGGCTTTCctgtgttgatttattattgatCCACCCAGTGGAAGTTACAACCTAACAGTTTTGTTATCGCTTTTcgaaatgaaatacatattcagtTGATATGATTATAGCACATTGCTTTTGCACCAAGAGCTATTTGCCTTTTGCAGTCATGCATGTACATTGAATACAGACAGATCATGGATGTACAGAACATGGAACCTGCAAGTCCTGCAAGCCAGGATCCCGACAAGTCCTTTGAATATGACCCAAAGGACTGGGCTCTACAATGCCACCCCTTTCTGAATTTCTCGGCAAAAGTAGTTACCCAGAACTACGAACACTGTCTGAGAAGAATGGTCAAAGGTGGACAACAGGGGTACAACTGCAAGATGAGAAGTGAGCTGACCAGGCTGAAGTCGTTCCAGGGATTCTCTGGCCTCTCCCCCTTCACCACAGAGGAACTGGCCAATGCTGGCTTCTTCTCCCTGCAACAAACAGCAGTGGTGCAGTGTTTCAATTGCGGACTGATCATAGGCCTCGGCAGCTTCCAGCCCCCCCGAGAGCTGCATCTCAAGTACAGGGAGGACTGTGGCTTCCAGAAAGGGCTGGACGTGGGAAACATTGACAAGTATAGCGTGCGGGTCAAAGTGCTGGATTCGGAGGTGAAAGAAGTCTCGGTGAACTGTAAAGTAGAGAGAGGCAGGTTTGAGAGCTTTGCATCTTGGCCCTTCTATTGTGACACGGAGCCTCTAATCCTCGCTGAATGTGGCTTTTTCTACACAGGTGTTAAGGATTATGTGCAGTGTTTCTCCTGTAGGGGTGTGCTGGGAGACTGGGAGGTGGGCAGTGACCCTTGGAAGGAGCATGCAAAGTGGTTTCCACAGTGTGACTACATCCGCACCAGGCTGTCAGACACCACCTTGTCAGAAGACACTGGTCTGaatttttttgcaaataaagATTTGCGAATGGAGACCTTCACTCAGTGGCCAAGTGATTCACCTGTATCTCCATCAAAACTGGTCCAGGCTGGATTCTTCTTAACAGGGATCTGTTCTGGTCTGGAGACTCTGGAAGAAAAGACCAGTTGCCTGCAGTCCATCCTCAAGAAAGCCTATTTAAGACAGGAGTTCAGTAGGTCATTTCCATGCGCTGATATCCACATTCCTTTTGATATCCGGTTGGTGTATACCCAGCTAGCAATGGTTACAAAGAACATCAGCAATGCTCCTGTGTCTCAGATAACCCTGACTGATCTGTTGAGGGAACTCCGAAACATCACCGTGATCGATGGGGAGGCAGGGAGTGGGAAAACTACCTGTCTGAAAAAGATTGCCATGCTTTGGGCTGAAGGAACCTGCCCTCTTCTGAGCAGATTTAAGTTGGTGTTTTATACCCCCTTGTGTTCCAGCCTTGAGAGCCCGAGTGAGAGGGTGATCGAAATACTCAGAGATCAGCTTGGCATGAAGGAGCTTCAAATGACCGAGTCAACCTTGCAAAGCTTGATCCAGCATAACCATGATAgtgtcctcttcctcctcgaTGATTTTGGAAAGCACTCAAGTCCTCTCCCAGCCCTGGTAGAGAAGGACCTGATTCAGCAGAACCACTTTTGGAACATCCCAGTCATTGTTGCTGTAAGAACCCAAAGCCTCCACCTCATTCGGAAACATGCTCAACTCCAGGTCACTATCCAGGACTTTCCCTTGTATGGCACCATTCACATCTGTCGGGAAATGCTGTCTTACAACATGAGCCTGGTGGAGGATGTGTACAAAAGACTGCATACACACATCATTCTCCAAATCATATTCAAGACCCCACTAATGGGACTAGCTGCTTGCATTTCAAGAATCAAGTTTCCCAAAAGGGTTTTTGATGCTGTCTGCATTCTCGACTGCTACCTGCAACTTGTTCAGAAGAGTCTAACAGGTCGAACAGAGCGCTTCAACACCACAGTGTCCAGCATCGGGAAGCTCTGCCTTAGAGGGCAGTTTGAAGGCAAATTTGAATTCTCAGGAGAGGATCTTCTCCATGCTGATGTGAAGGAATCTGAGGCCCTGGAGTTGGGCCTGCTCAACAAGTTCAGCACCCAGAGGTTGCGGCCCGTCTATCGCATCATTCATGTCTTTTTCCAGGAGTACCTAGCAGCAGTGCGCATGAATGAGCTCTTGACCTCTGATGTATCTGAAGACCAGGAGCAAAGTCAGAAGTACCTTGGGCAGATTGATTCTGTTGTGAAATTCATGTGCTTTGAGTCCTTCCTGTGTTTCACTAGCAAAATGTCAAAGACATCAGCAACAGTCATCACAGACTTTGTACTTAATGGATTAAACAGAGATACTGCTTTCAACAGTGATGAGGTCGTTAAAAACTTCTGTGTTCAACACCCTCAAGTTAAAGAAGCAATCTATTATTTAAGTTATATGGAGAGCACTTCTACTACATTTACAGATACGTATCTCATAGACCATGTTGGATTGATGCTGTTCGAATCCCCGTATCTCTCCACGTGTGCACCCCTACTGACAGATTTCATGAAGGGGAAAATGCTTGTTATCAGCCCATGTCCTTACTGGGGATTATCGTATTTCATAAATCAGTATCCTGAGAGTGTCACAGGGGTCAAGGGCTTCCATCTGAGCATTTCTCAAGGATTTAGCAACTGGACTGAGGAGATCGAGAAGCCCTTGTCTGCAGGGGAGCTACCAGTGGTCGACGAGCAGTATGCCATTGCATTCAGTGACCCCGAGGACTTAAAGATGCAGAAAGCATCACTTACAGATAATCTGAATTTTGCTAtcagtttgttttcctctttaattCCCAAGGTCCTCGTCCAGGTATTGTGTTCTGTCCGCAACGCCTACAAAATACCACTGATGGACATTACTATCATTGACACGAGGAAAGTGAAAGAATCTGACCTTGTGAATATGGGTATTCTTTTTTCAATGTCAGAATCTGTAACTCTGGACATATTGCATAGTCCAGGGGTAGTGGAAAAACTGTGGACAGCCCTGGAAGGGAACATGTCCATGGTGAAGAAGCTGAGTGTTGTGGATTTTGCCCTAAATGAAAAAGAGCAGGCCACTCTCCTCTCATTGACCAATCTAACTGAATTAAAAGTGCAGATTTTGAAAAAAGGGGAAGTACCagAATTACTGCTTGGGCAATTACATAAATTTAGAAATCTTCAGTCTGTGCAACTGGGACTATGtaaagaacacatttttgaTATGCTACCCATTGGGTTCAGCAAGATGAGAACACTCAGGAAACTGCACTTGAGCATTGATGAGAGAGCAAATTATACCATGCTGGCTTGGCTTTTGAAACATTTCACACAGCTTTCCAGCTTTACATTGTATTGCCCCTCCTGTCCTGCTTTACTGGACATTCTGGACTCACTGCCCCATAACAGTCTACAAGAACTGGAGCTGGGTATTATCGAGTTGACTGATGCACAGCTCCAGCACTGTAGAAGTGTGCTCAGAGAGCTTAGAAACCTTGAAGTTCTGCATCTGCCTCATGGAAAAGGGACGGAGGCTGTGGTCGAATCTCTTATCACAGCCTGCCAGACTCTGCAGGGATTGAGGTCTCTGCGAATACACTCATGTTTAAATGATGAGAACCTGGTTAGAATTGcaaaAGCAACTCTGGAAGGCAGCTTCATCAAACTTAGAGAACTGCTGTTGGATTGGAACATCTGCACGACGGACCGAGGCTGGTGGGAGTTTTTCAACACACTGGGGAGTCTGAAGGAACTAGAGAAGCTTAGTGTTTCCATGCCACTGGAGCACCTGCTAAAGCCTTCCTCCTCTACAGTCATCGCCTTTGTGAGAGCCATCTCCCAGCTCCCCAGAGTCAGGCACATCATCGTAGCAGGGTGGCTGCTGGACCAGATGGACCTGGATATGTTTAATGCCATGAAGAAGAAGCATCCCCAGTCACAGAACATGATACTGACTTCCAAAATCTGTCATGAGACGACTATCCCATCCACCAAGTGTGCCTTCTTTGGTGAGTGGGGCATAGACCCCCTGGCGGACCGAGCGGTACACCCTCCTCACGGGGAAAGGCTGCAAGGTGCCATCGGGTCGCAGGGTGTAAAGCAGGAGGCCAGTGCGCACATCCTTTGCCAGGACAGACATGCGCTGCCCGGCACTAGGACTGGAGGAGTTGGCGGGGGCAATGAAATGCACATGATCTTCCGAGACACACAGCATCTTGACACCAGCCCCAGCGTCCCCCTGTCCCTCTCTACTGGACATTGCCTGGGCCTCTCCCTGTCCTCCCATCTCTAG

Function

GO: NA

KEGG:

id description
K12807 NAIP, BIRC1; baculoviral IAP repeat-containing protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164243 lncRNA upstream 24356 26978775 ~ 26980289 (+) True G131072
TU164189 lncRNA upstream 211092 26793271 ~ 26793553 (+) True G131021
TU164185 lncRNA upstream 233484 26770880 ~ 26771161 (+) True G131017
TU164097 lncRNA upstream 669355 26296707 ~ 26335290 (+) True G130948
TU164023 lncRNA upstream 941952 26061148 ~ 26062693 (+) True G130884
AMCG00001365 mRNA upstream 50354 26904363 ~ 26954291 (+) False AMCG00001365
AMCG00001361 mRNA upstream 123848 26859094 ~ 26880797 (+) True AMCG00001361
AMCG00001363 mRNA upstream 166380 26836487 ~ 26838265 (+) True AMCG00001363
AMCG00001360 mRNA upstream 459136 26537952 ~ 26545509 (+) True AMCG00001360
AMCG00001357 mRNA upstream 485360 26511557 ~ 26519285 (+) True AMCG00001357
TU164234 other upstream 50048 26951908 ~ 26954597 (+) True AMCG00001365
TU164194 other upstream 141513 26856599 ~ 26863132 (+) False AMCG00001361
TU163730 other upstream 2413170 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 2550260 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 3837989 23166263 ~ 23166656 (+) True G130335

Expression Profile