RNA id: TU157268


Basic Information

Item Value
RNA id TU157268
length 243
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G125484
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 91043 ~ 91285 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGAGAAACCATGGAAACGAACGGAGGAAGAATAAGAGCGAACGGAGCCGGAAGCTGAAAGAGCAGCGAGTTAGctagtaaagtaaagtaaagatTGAACTAAATGCGGCGGTGGTTGGGACAGACTTCTGGGGGCGAGAAGAGGAACGAGCCAGGGGATGAAGACAGAGAAAcgaagaaaataaattgtaatgcCAAATGGCTGACGGGTCGTGAATGGCTTGTGTTTGATCATGAAAATNNN

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157269 lncRNA downstream 998 92283 ~ 92620 (+) True G125485
TU157299 lncRNA downstream 24826 116111 ~ 117302 (+) True G125510
TU157309 lncRNA downstream 37574 128859 ~ 129127 (+) True G125516
TU157379 lncRNA downstream 248355 339640 ~ 341771 (+) True G125561
TU157380 lncRNA downstream 248355 339640 ~ 403591 (+) False G125561
AMCG00000681 mRNA upstream 50447 38752 ~ 40596 (+) True AMCG00000681
AMCG00000680 mRNA upstream 64762 21907 ~ 26281 (+) True AMCG00000680
AMCG00000683 mRNA downstream 46820 138105 ~ 143895 (+) True AMCG00000683
AMCG00000694 mRNA downstream 276291 367576 ~ 414428 (+) True AMCG00000694
AMCG00000695 mRNA downstream 323159 414444 ~ 414795 (+) True AMCG00000695
AMCG00000702 mRNA downstream 1020596 1111881 ~ 1133185 (+) True AMCG00000702
AMCG00000705 mRNA downstream 1135032 1226317 ~ 1233934 (+) True AMCG00000705
TU157377 other downstream 248355 339640 ~ 341771 (+) False G125561
TU157655 other downstream 1508411 1599696 ~ 1600639 (+) False AMCG00000723
TU157662 other downstream 1577560 1668845 ~ 1696247 (+) True AMCG00000729
TU159397 other downstream 8525914 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 10056572 10147857 ~ 10154187 (+) False AMCG00000949

Expression Profile