Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU159397 |
| length | 2213 |
| RNA type | TUCP |
| GC content | 0.35 |
| exon number | 3 |
| gene id | G127134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 8617199 ~ 8620195 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| GO:0022890 | inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | molecular_function |
| GO:0015075 | ion transmembrane transporter activity | molecular_function |
| GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
| GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU159357 | lncRNA | upstream | 322326 | 8294518 ~ 8294873 (+) | True | G127096 |
| TU159352 | lncRNA | upstream | 327393 | 8288789 ~ 8289806 (+) | True | G127091 |
| TU159285 | lncRNA | upstream | 971479 | 7629902 ~ 7645720 (+) | False | G127038 |
| TU159286 | lncRNA | upstream | 971479 | 7629902 ~ 7645720 (+) | False | G127038 |
| TU159287 | lncRNA | upstream | 971479 | 7629902 ~ 7645720 (+) | True | G127038 |
| TU159408 | lncRNA | downstream | 18401 | 8638596 ~ 8639823 (+) | True | G127144 |
| TU159484 | lncRNA | downstream | 461132 | 9081327 ~ 9082881 (+) | True | G127206 |
| TU159589 | lncRNA | downstream | 742912 | 9363107 ~ 9377589 (+) | True | G127278 |
| TU159869 | lncRNA | downstream | 1822798 | 10442993 ~ 10444937 (+) | True | G127509 |
| TU160196 | lncRNA | downstream | 3051573 | 11671768 ~ 11742750 (+) | True | G127774 |
| AMCG00000904 | mRNA | upstream | 665 | 8609600 ~ 8616534 (+) | True | AMCG00000904 |
| AMCG00000903 | mRNA | upstream | 8566 | 8590668 ~ 8608633 (+) | True | AMCG00000903 |
| AMCG00000907 | mRNA | upstream | 41889 | 8574840 ~ 8575310 (+) | True | AMCG00000907 |
| AMCG00000908 | mRNA | upstream | 433174 | 8182377 ~ 8184025 (+) | True | AMCG00000908 |
| AMCG00000906 | mRNA | upstream | 453213 | 8112982 ~ 8163986 (+) | True | AMCG00000906 |
| AMCG00000905 | mRNA | downstream | 8386 | 8628581 ~ 8635880 (+) | True | AMCG00000905 |
| AMCG00000910 | mRNA | downstream | 21479 | 8641674 ~ 8645197 (+) | True | AMCG00000910 |
| AMCG00000913 | mRNA | downstream | 26458 | 8646653 ~ 8652047 (+) | True | AMCG00000913 |
| AMCG00000911 | mRNA | downstream | 178391 | 8798586 ~ 8799621 (+) | True | AMCG00000911 |
| AMCG00000912 | mRNA | downstream | 249769 | 8869964 ~ 8880928 (+) | True | AMCG00000912 |
| TU157662 | other | upstream | 6920952 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 7016560 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU157377 | other | upstream | 8275428 | 339640 ~ 341771 (+) | False | G125561 |
| TU159756 | other | downstream | 1527662 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU160309 | other | downstream | 3379469 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU161370 | other | downstream | 6549716 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 6788917 | 15409112 ~ 15420880 (+) | False | G128823 |
| TU162207 | other | downstream | 9402865 | 18023060 ~ 18044251 (+) | True | G129365 |
