RNA id: TU163362



Basic Information


Item Value
RNA id TU163362
length 394
RNA type TUCP
GC content 0.45
exon number 1
gene id G130335
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23166263 ~ 23166656 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


attcgggtatattgtcaaaagtgtagaatttaaaacaagggaagtaatgttaagactgtataatgcactagttagacctcatctggaatactgtgtggagctctgggcaccacacttcaagaaggatattgctgctctggaggcagttcagaggagagcaaccagatttattccaggtctgaagggaatgtcctactcagagagactgagggaactgaaccttttcaccctggaacagaggagactatgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaacggaaaacaggaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163171 lncRNA upstream 361205 22799097 ~ 22805058 (+) True G130166
TU163165 lncRNA upstream 541060 22624958 ~ 22625203 (+) True G130160
TU163145 lncRNA upstream 550106 22615284 ~ 22616157 (+) True G130144
TU163154 lncRNA upstream 583299 22582698 ~ 22582964 (+) True G130153
TU163153 lncRNA upstream 583642 22582316 ~ 22582621 (+) True G130152
TU163374 lncRNA downstream 48281 23214937 ~ 23217500 (+) True G130346
TU163376 lncRNA downstream 57376 23224032 ~ 23224597 (+) True G130348
TU163399 lncRNA downstream 114155 23280811 ~ 23281334 (+) True G130365
TU163484 lncRNA downstream 449724 23616380 ~ 23620977 (+) False AMCG00001292
TU163485 lncRNA downstream 449724 23616380 ~ 23620977 (+) False AMCG00001292
AMCG00001285 mRNA upstream 46308 23100907 ~ 23119955 (+) True AMCG00001285
AMCG00001284 mRNA upstream 132764 23031304 ~ 23033499 (+) True AMCG00001284
AMCG00001279 mRNA upstream 413407 22646113 ~ 22752856 (+) True AMCG00001279
AMCG00001276 mRNA upstream 559008 22584027 ~ 22607255 (+) True AMCG00001276
AMCG00001275 mRNA upstream 600643 22551140 ~ 22565620 (+) True AMCG00001275
AMCG00001292 mRNA downstream 398495 23565151 ~ 23685121 (+) False AMCG00001292
AMCG00001294 mRNA downstream 555167 23721823 ~ 23759069 (+) True AMCG00001294
AMCG00001300 mRNA downstream 736672 23903328 ~ 23913809 (+) True AMCG00001300
AMCG00001298 mRNA downstream 781793 23948449 ~ 23990082 (+) True AMCG00001298
AMCG00001297 mRNA downstream 905773 24072429 ~ 24090849 (+) True AMCG00001297
TU162879 other upstream 1889384 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 2087393 21077135 ~ 21078870 (+) True G129877
TU162800 other upstream 2223866 20942072 ~ 20942397 (+) True G129843
TU162792 other upstream 2241023 20918558 ~ 20925240 (+) True AMCG00001241
TU162705 other upstream 2489406 20611272 ~ 20676857 (+) True AMCG00001236
TU163702 other downstream 1267137 24433793 ~ 24454385 (+) True G130616
TU163730 other downstream 1417523 24584179 ~ 24591475 (+) False AMCG00001315
TU164194 other downstream 3689943 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 3785252 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile