RNA id: TU163591



Basic Information


Item Value
RNA id TU163591
length 287
lncRNA type inter_gene
GC content 0.40
exon number 3
gene id G130531
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23923211 ~ 23923877 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACAGAGTGTACAGCCAAACTTATAATTGAGTTATCTAAGATAAACAACATCTGGAATAGAGGGGCCAATTGGATTGCCAGAAAAAGTCATCACCATCTGCTTTATATATAAGGCTGTaactaaaacatttgaaaacatttgctCTGCAGTTGCTTCAGTACACTTTGTATGCTGGACTCAGgAGGGACAGGACAATGGCTGCACTTATACTTCTGCTTATTGCAAAGGTATGCTATGCCATGTGGGTACTTCTCAGCAATCATCCATTGGTTTCAGCAGGGATGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163544 lncRNA upstream 67095 23855720 ~ 23856116 (+) True G130492
TU163512 lncRNA upstream 193982 23729005 ~ 23729229 (+) True G130461
TU163486 lncRNA upstream 302234 23616380 ~ 23620977 (+) False AMCG00001292
TU163590 lncRNA downstream 1001 23924878 ~ 23926011 (+) True G130530
TU163619 lncRNA downstream 128945 24052822 ~ 24120461 (+) True G130552
TU163703 lncRNA downstream 500688 24424565 ~ 24437017 (+) True AMCG00001312
TU163746 lncRNA downstream 827242 24751119 ~ 24751414 (+) True G130648
TU163787 lncRNA downstream 1098802 25022679 ~ 25023049 (+) True G130684
AMCG00001300 mRNA upstream 9402 23903328 ~ 23913809 (+) True AMCG00001300
AMCG00001294 mRNA upstream 164142 23721823 ~ 23759069 (+) True AMCG00001294
AMCG00001292 mRNA upstream 238090 23565151 ~ 23685121 (+) False AMCG00001292
AMCG00001285 mRNA upstream 803256 23100907 ~ 23119955 (+) True AMCG00001285
AMCG00001284 mRNA upstream 889712 23031304 ~ 23033499 (+) True AMCG00001284
AMCG00001298 mRNA downstream 24572 23948449 ~ 23990082 (+) True AMCG00001298
AMCG00001297 mRNA downstream 148552 24072429 ~ 24090849 (+) True AMCG00001297
AMCG00001299 mRNA downstream 256373 24180250 ~ 24207621 (+) True AMCG00001299
AMCG00001309 mRNA downstream 332959 24256836 ~ 24286635 (+) True AMCG00001309
AMCG00001302 mRNA downstream 398794 24322671 ~ 24351647 (+) True AMCG00001302
TU163362 other upstream 756555 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 2646332 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 2844341 21077135 ~ 21078870 (+) True G129877
TU162800 other upstream 2980814 20942072 ~ 20942397 (+) True G129843
TU162792 other upstream 2997971 20918558 ~ 20925240 (+) True AMCG00001241
TU163702 other downstream 509916 24433793 ~ 24454385 (+) True G130616
TU163730 other downstream 660302 24584179 ~ 24591475 (+) False AMCG00001315
TU164194 other downstream 2932722 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 3028031 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile