RNA id: TU163792



Basic Information


Item Value
RNA id TU163792
length 358
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G130689
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25056621 ~ 25056978 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttagttgcaatgcctttaatacacgcagcgtggagaggaacagtcaatcaagaagatcccaaagtcgctctgccttcatttaaaagtcagaggcttttatacacaaaaaacaaagatctggttacaatcacagtcattactatattatcttagagagttagctaagcagaatatatcattataagacagagttcataggtcaacacatggattagggagcaggcacttcaatcatactgtttgacattgtctccaagattctcatcgtaaataacaaacagaaaacaagctaccttctggcttgaccttatctttcttaagtatacaagagagtagAATAGATATGAGGGAAAGAATt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163787 lncRNA upstream 33572 25022679 ~ 25023049 (+) True G130684
TU163746 lncRNA upstream 305207 24751119 ~ 24751414 (+) True G130648
TU163703 lncRNA upstream 619604 24424565 ~ 24437017 (+) True AMCG00001312
TU163619 lncRNA upstream 936160 24052822 ~ 24120461 (+) True G130552
TU163590 lncRNA upstream 1130610 23924878 ~ 23926011 (+) True G130530
TU163795 lncRNA downstream 29683 25086661 ~ 25086898 (+) True G130692
TU163798 lncRNA downstream 66616 25123594 ~ 25126079 (+) True G130695
TU163808 lncRNA downstream 139404 25196382 ~ 25196991 (+) True G130705
TU163814 lncRNA downstream 158247 25215225 ~ 25215735 (+) True G130711
TU163815 lncRNA downstream 158960 25215938 ~ 25217050 (+) True G130712
AMCG00001322 mRNA upstream 11809 25029903 ~ 25044812 (+) True AMCG00001322
AMCG00001319 mRNA upstream 194916 24702643 ~ 24861705 (+) True AMCG00001319
AMCG00001317 mRNA upstream 396692 24645852 ~ 24659929 (+) True AMCG00001317
AMCG00001315 mRNA upstream 450149 24587338 ~ 24606472 (+) True AMCG00001315
AMCG00001314 mRNA upstream 480250 24568365 ~ 24576371 (+) True AMCG00001314
AMCG00001324 mRNA downstream 62658 25119636 ~ 25146056 (+) True AMCG00001324
AMCG00001329 mRNA downstream 93319 25150297 ~ 25150756 (+) True AMCG00001329
AMCG00001330 mRNA downstream 93786 25150764 ~ 25164833 (+) True AMCG00001330
AMCG00001325 mRNA downstream 189398 25246376 ~ 25296858 (+) True AMCG00001325
AMCG00001328 mRNA downstream 242118 25299096 ~ 25302688 (+) True AMCG00001328
TU163730 other upstream 465146 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 602236 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 1889965 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 3779742 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 3977751 21077135 ~ 21078870 (+) True G129877
TU164194 other downstream 1799621 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 1894930 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile