RNA id: TU163913



Basic Information


Item Value
RNA id TU163913
length 265
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G130789
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25582342 ~ 25582606 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCATCCCATGCAATCCCTAACACTGCCAGGCTTTGCTTCTCAATTCCTTCCACCAAGCAagttgcttctctcttccaTTGGGATGAAGGACAGAGCAGAGGAAGGAGAAGGTACACCTATGCCAGCAGAAGAGAAGATCATATGAGGGACAGCAAGAATAGAGGACTGATGATAGGTAGGAAGGggcaaaatgtacaaaagtaTCTATATGCAAAGATGAACCTTAGAATGCAAATAAGAGAACATTGATATGAACTCCTGTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163896 lncRNA upstream 131484 25450516 ~ 25450858 (+) True G130773
TU163895 lncRNA upstream 132036 25449817 ~ 25450306 (+) False AMCG00001331
TU163875 lncRNA upstream 184708 25382179 ~ 25397634 (+) True G130757
TU163820 lncRNA upstream 336188 25221616 ~ 25246154 (+) True G130715
TU163815 lncRNA upstream 365292 25215938 ~ 25217050 (+) True G130712
TU163916 lncRNA downstream 50628 25633234 ~ 25633576 (+) True G130792
TU163941 lncRNA downstream 92611 25675217 ~ 25675482 (+) True G130817
TU163968 lncRNA downstream 145247 25727853 ~ 25729837 (+) True G130839
TU163974 lncRNA downstream 152949 25735555 ~ 25749501 (+) False AMCG00001337
TU164023 lncRNA downstream 478542 26061148 ~ 26062693 (+) True G130884
AMCG00001334 mRNA upstream 966 25552444 ~ 25581376 (+) True AMCG00001334
AMCG00001331 mRNA upstream 132032 25423687 ~ 25450310 (+) True AMCG00001331
AMCG00001332 mRNA upstream 217046 25363893 ~ 25365296 (+) True AMCG00001332
AMCG00001328 mRNA upstream 279654 25299096 ~ 25302688 (+) True AMCG00001328
AMCG00001325 mRNA upstream 285484 25246376 ~ 25296858 (+) True AMCG00001325
AMCG00001335 mRNA downstream 47441 25630047 ~ 25636339 (+) True AMCG00001335
AMCG00001333 mRNA downstream 81259 25663865 ~ 25673767 (+) True AMCG00001333
AMCG00001338 mRNA downstream 136298 25718904 ~ 25725679 (+) True AMCG00001338
AMCG00001337 mRNA downstream 156518 25739124 ~ 25749380 (+) True AMCG00001337
AMCG00001348 mRNA downstream 439375 26021981 ~ 26069510 (+) True AMCG00001348
TU163730 other upstream 990867 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 1127957 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 2415686 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 4305463 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 4503472 21077135 ~ 21078870 (+) True G129877
TU164194 other downstream 1273993 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 1369302 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile