RNA id: TU164023



Basic Information


Item Value
RNA id TU164023
length 227
lncRNA type sense_over
GC content 0.29
exon number 2
gene id G130884
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26061148 ~ 26062693 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTTACTCAGTTACAATGGATATGTtttgaaacaaaactgaaataatgttgttttttttttttttttttttattattcctgccttgtgtcaAAACAGCTTTCAGACTATTTCAAACTGTAAACAACAATAACCACTTTAAATCATTCATGACAGACAGTCACTATACTATTATAAAAGCACAGGAATGCATTGGAAAGTCTATTTttgtaaaaggaaaacagtGGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163974 lncRNA upstream 311647 25735555 ~ 25749501 (+) False AMCG00001337
TU163968 lncRNA upstream 331311 25727853 ~ 25729837 (+) True G130839
TU163941 lncRNA upstream 385666 25675217 ~ 25675482 (+) True G130817
TU163916 lncRNA upstream 427572 25633234 ~ 25633576 (+) True G130792
TU163913 lncRNA upstream 478542 25582342 ~ 25582606 (+) True G130789
TU164097 lncRNA downstream 234014 26296707 ~ 26335290 (+) True G130948
TU164185 lncRNA downstream 708187 26770880 ~ 26771161 (+) True G131017
TU164189 lncRNA downstream 730578 26793271 ~ 26793553 (+) True G131021
TU164243 lncRNA downstream 916082 26978775 ~ 26980289 (+) True G131072
AMCG00001337 mRNA upstream 311768 25739124 ~ 25749380 (+) True AMCG00001337
AMCG00001338 mRNA upstream 335469 25718904 ~ 25725679 (+) True AMCG00001338
AMCG00001333 mRNA upstream 387381 25663865 ~ 25673767 (+) True AMCG00001333
AMCG00001335 mRNA upstream 424809 25630047 ~ 25636339 (+) True AMCG00001335
AMCG00001334 mRNA upstream 479772 25552444 ~ 25581376 (+) True AMCG00001334
AMCG00001350 mRNA downstream 12877 26075570 ~ 26097013 (+) True AMCG00001350
AMCG00001349 mRNA downstream 37585 26100278 ~ 26117478 (+) True AMCG00001349
AMCG00001351 mRNA downstream 60150 26122843 ~ 26140826 (+) True AMCG00001351
AMCG00001352 mRNA downstream 125196 26187889 ~ 26189870 (+) True AMCG00001352
AMCG00001347 mRNA downstream 168593 26231286 ~ 26268997 (+) True AMCG00001347
TU163730 other upstream 1469673 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 1606763 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 2894492 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 4784269 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 4982278 21077135 ~ 21078870 (+) True G129877
TU164194 other downstream 793906 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 889215 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile