RNA id: AMCG00002532


Basic Information

Item Value
RNA id AMCG00002532
length 390
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00002532
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18058532 ~ 18062065 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAACAGTGGAATCTGTGTCTGCGTTTTACTGGCTGTGTTCTCGACAACCTGCTTGGGTCGTCCGTCGGCGGGCTCCGAAGATGAGGGAATCCCAGCCACAGCACAGCTCGACCAGGGCCTGTCAGGACAGCACCGGCACGTCCGCTCAGCTCCATCTAACGGTCAGCTGAAGCCTTTCATTAAGGGGGATGAGAGCCTGGAGGAAAGAACCAACCTGGGGGAGCTGCTGGCAAGATTGATATCTAGGAAAGGATCCTTTCGTAGAAACTCCACAATGAACAATAAGGCAGGCAGCATGAGCGCCAACCACAGGATAAAAGACAGAGACTACCTGGGATGGATGGACTTTGGCCGCCGCAGTGCTGAAGAATATGAATATTCATCATAA

Function

GO:

id name namespace
GO:0030252 growth hormone secretion biological_process
GO:0007631 feeding behavior biological_process
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05226 CCK; cholecystokinin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155273 lncRNA downstream 6200 18051097 ~ 18052332 (-) True G123845
TU155254 lncRNA downstream 63769 17933464 ~ 17994763 (-) True AMCG00002533
TU155242 lncRNA downstream 243066 17811518 ~ 17815466 (-) True G123824
TU155213 lncRNA downstream 362028 17690038 ~ 17696504 (-) False AMCG00002524
TU155202 lncRNA downstream 383422 17660067 ~ 17675110 (-) True G123788
TU155304 lncRNA upstream 143603 18205668 ~ 18206132 (-) True G123876
TU155370 lncRNA upstream 407169 18469234 ~ 18469607 (-) True G123926
TU155412 lncRNA upstream 522644 18584709 ~ 18585930 (-) True G123961
TU155446 lncRNA upstream 720080 18782145 ~ 18782366 (-) True G123981
TU155557 lncRNA upstream 1221813 19283878 ~ 19284293 (-) True G124068
AMCG00002533 mRNA downstream 16959 17992061 ~ 18041573 (-) False AMCG00002533
AMCG00002531 mRNA downstream 155722 17876005 ~ 17902810 (-) True AMCG00002531
AMCG00002530 mRNA downstream 201464 17838579 ~ 17857068 (-) True AMCG00002530
AMCG00002524 mRNA downstream 352243 17690008 ~ 17706289 (-) True AMCG00002524
AMCG00002523 mRNA downstream 373235 17678022 ~ 17685297 (-) True AMCG00002523
AMCG00002536 mRNA upstream 110066 18172131 ~ 18182627 (-) True AMCG00002536
AMCG00002539 mRNA upstream 141312 18203377 ~ 18204483 (-) True AMCG00002539
AMCG00002537 mRNA upstream 153730 18215795 ~ 18224850 (-) True AMCG00002537
AMCG00002538 mRNA upstream 164903 18226968 ~ 18241221 (-) True AMCG00002538
AMCG00002542 mRNA upstream 258074 18320139 ~ 18335125 (-) True AMCG00002542
TU155250 other downstream 69067 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 1218810 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 3112221 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 4404296 13649228 ~ 13654236 (-) False AMCG00002421
TU154047 other downstream 5029126 13028197 ~ 13029406 (-) True G122862
TU156333 other upstream 5023929 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 5119856 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 6199500 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 6229722 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 8241817 26303882 ~ 26305923 (-) False AMCG00002688

Expression Profile