RNA id: TU192605


Basic Information

Item Value
RNA id TU192605
length 293
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G152942
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 4531440 ~ 4531732 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtagttatcaaattattaaaaatacatctatataaTGTAGattgtacataaatatatatgtatgtaaataaacaagtatatcaatatatatctcaacattttaaaatcttcacATTTGTCTACACAACATTTGTGCACTGAGCACACGACTGAAGCAAaaattatttatgaaatgtgGGAAAAACGAAAAGCCGTTCCTCGATTATCTTAAAAACTGAAGTCCTCAATATTAGTCTAATGTCTGATGCTTTTTACCAGCAGATGATCAAAGTGGTATTTTTGTAAATTTCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU192577 lncRNA downstream 231042 4292030 ~ 4300398 (-) True G152915
TU192551 lncRNA downstream 271128 4257221 ~ 4260312 (-) True G152894
TU192507 lncRNA downstream 537919 3989919 ~ 3993521 (-) True G152853
TU192455 lncRNA downstream 662231 3859796 ~ 3869209 (-) False AMCG00005560
TU192431 lncRNA downstream 738996 3788208 ~ 3792444 (-) True G152815
TU192843 lncRNA upstream 819621 5351353 ~ 5352345 (-) True G153141
TU192845 lncRNA upstream 821621 5353353 ~ 5355697 (-) True G153143
TU192894 lncRNA upstream 955577 5487309 ~ 5489599 (-) True G153178
TU192961 lncRNA upstream 1116626 5648358 ~ 5648709 (-) True G153236
TU192977 lncRNA upstream 1209760 5741492 ~ 5748572 (-) True G153248
AMCG00005539 mRNA downstream 238569 4284717 ~ 4292871 (-) True AMCG00005539
AMCG00005568 mRNA downstream 511694 4004263 ~ 4019746 (-) True AMCG00005568
AMCG00005560 mRNA downstream 662984 3850136 ~ 3868456 (-) True AMCG00005560
AMCG00005561 mRNA downstream 710098 3807765 ~ 3821342 (-) True AMCG00005561
AMCG00005552 mRNA downstream 839333 3652635 ~ 3692107 (-) True AMCG00005552
AMCG00005547 mRNA upstream 2408 4534140 ~ 4536045 (-) True AMCG00005547
AMCG00005549 mRNA upstream 11594 4543326 ~ 4544200 (-) True AMCG00005549
AMCG00005548 mRNA upstream 15345 4547077 ~ 4551659 (-) True AMCG00005548
AMCG00005555 mRNA upstream 29201 4560933 ~ 4596482 (-) True AMCG00005555
AMCG00005541 mRNA upstream 146918 4678650 ~ 4696115 (-) True AMCG00005541
TU192573 other downstream 241548 4288665 ~ 4289892 (-) False AMCG00005539
TU192222 other downstream 1440726 3071860 ~ 3090714 (-) False G152645
TU192197 other downstream 1655431 2875286 ~ 2876009 (-) False AMCG00005491
TU191946 other downstream 2201756 2197354 ~ 2329684 (-) False AMCG00005532
TU191793 other downstream 2810238 1708683 ~ 1721202 (-) True AMCG00005461
TU192831 other upstream 769037 5300769 ~ 5302198 (-) True G153130
TU193087 other upstream 1549503 6081235 ~ 6082866 (-) True G153342
TU193235 other upstream 1958523 6490255 ~ 6496571 (-) True AMCG00005674
TU193605 other upstream 3253822 7785554 ~ 7788321 (-) True G153733
TU193670 other upstream 3467604 7999336 ~ 8001340 (-) False AMCG00005704

Expression Profile