RNA id: AMCG00007395



Basic Information


Item Value
RNA id AMCG00007395
length 351
RNA type mRNA
GC content 0.46
exon number 5
gene id AMCG00007395
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17560978 ~ 17571550 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGAAGTGTGCCGGTGTACTGTGCGTCTCCCTAATACTGTGTGCTACCCTGTCCGAGACCTTTGGACTAGTTCTTTcgGCAAAAGAAAAGAGAGGCTGGACTCTAAACAGTGCTGGCTATTTACTAGGGCCCCGTCGTATTGAACACCTTATACAGATAAAGGATACTCCCAGTGCAAGGGGGAGAGAAGAACCGCTTGGTACATATGCGGTCGACAATCACAGATCCCTCAATGACAAACACGGCCTTGCTGGGAAACGGAATCTGCAGATGGAGGATGATATTAAAACaggtgaaacaaataaaatacataaaatgatacCTTTCTATGaggtcatcatcccctgA

Function


GO: NA

KEGG:

id description
K05244 GAL; galanin

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29493 lncRNA upstream 69217 17491445 ~ 17491761 (+) True G23540
TU29491 lncRNA upstream 73578 17487117 ~ 17487400 (+) True G23538
TU29465 lncRNA upstream 81229 17474963 ~ 17479749 (+) True G23515
TU29444 lncRNA upstream 208188 17352572 ~ 17352790 (+) True G23497
TU29383 lncRNA upstream 512660 17047930 ~ 17048318 (+) True G23449
TU29573 lncRNA downstream 249297 17820847 ~ 17821117 (+) True G23610
TU29566 lncRNA downstream 250216 17821766 ~ 17823318 (+) False G23604
TU29567 lncRNA downstream 250216 17821766 ~ 17823337 (+) True G23604
TU29595 lncRNA downstream 333008 17904558 ~ 17904949 (+) True G23628
TU29598 lncRNA downstream 371226 17942776 ~ 17943110 (+) True G23631
AMCG00007396 mRNA upstream 50016 17492509 ~ 17510962 (+) True AMCG00007396
AMCG00007398 mRNA upstream 86100 17458080 ~ 17474878 (+) True AMCG00007398
AMCG00007397 mRNA upstream 117771 17424426 ~ 17443207 (+) True AMCG00007397
AMCG00007394 mRNA upstream 149610 17387943 ~ 17411368 (+) True AMCG00007394
AMCG00007390 mRNA upstream 250412 17304521 ~ 17310566 (+) True AMCG00007390
AMCG00007400 mRNA downstream 6709 17578259 ~ 17583440 (+) True AMCG00007400
AMCG00007402 mRNA downstream 80081 17651631 ~ 17652812 (+) True AMCG00007402
AMCG00007403 mRNA downstream 88132 17659682 ~ 17675554 (+) True AMCG00007403
AMCG00007404 mRNA downstream 129610 17701160 ~ 17729279 (+) True AMCG00007404
AMCG00007407 mRNA downstream 482545 18054095 ~ 18058956 (+) True AMCG00007407
TU28988 other upstream 2273018 15286497 ~ 15287960 (+) False AMCG00007352
TU28829 other upstream 3071286 14478673 ~ 14489692 (+) True AMCG00007337
TU28420 other upstream 6947874 10611196 ~ 10613104 (+) True AMCG00007307
TU28037 other upstream 8061250 9436524 ~ 9499728 (+) True G22372
TU27900 other upstream 8849667 8704657 ~ 8711311 (+) True AMCG00007253
TU29675 other downstream 627218 18198768 ~ 18201960 (+) True AMCG00007417
TU29676 other downstream 635528 18207078 ~ 18208308 (+) True G23698
TU29705 other downstream 718558 18290108 ~ 18292338 (+) True G23724
TU29768 other downstream 996219 18567769 ~ 18570464 (+) False AMCG00007433
TU29920 other downstream 1479792 19051342 ~ 19056133 (+) True G23893

Expression Profile