Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008283 |
| length | 744 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 2 |
| gene id | AMCG00008283 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 49879979 ~ 49881352 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004977 | melanocortin receptor activity | molecular_function |
| id | description |
|---|---|
| K04201 | MC3R; melanocortin 3 receptor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37396 | lncRNA | upstream | 21985 | 49839512 ~ 49857994 (+) | True | AMCG00008279 |
| TU37395 | lncRNA | upstream | 40655 | 49838005 ~ 49839324 (+) | True | G29883 |
| TU37386 | lncRNA | upstream | 81996 | 49796444 ~ 49797983 (+) | True | G29877 |
| TU37362 | lncRNA | upstream | 335248 | 49544362 ~ 49544731 (+) | True | G29853 |
| TU37320 | lncRNA | upstream | 500605 | 49368645 ~ 49379374 (+) | False | G29823 |
| TU37507 | lncRNA | downstream | 172361 | 50053713 ~ 50053971 (+) | True | G29973 |
| TU37513 | lncRNA | downstream | 213686 | 50095038 ~ 50095273 (+) | True | G29979 |
| TU37521 | lncRNA | downstream | 244338 | 50125690 ~ 50126131 (+) | True | G29986 |
| TU37525 | lncRNA | downstream | 266297 | 50147649 ~ 50148723 (+) | True | G29990 |
| TU37526 | lncRNA | downstream | 274352 | 50155704 ~ 50156262 (+) | True | G29991 |
| AMCG00008279 | mRNA | upstream | 21403 | 49842117 ~ 49858576 (+) | False | AMCG00008279 |
| AMCG00008281 | mRNA | upstream | 283186 | 49587067 ~ 49596793 (+) | True | AMCG00008281 |
| AMCG00008280 | mRNA | upstream | 319899 | 49549906 ~ 49560080 (+) | True | AMCG00008280 |
| AMCG00008272 | mRNA | upstream | 408364 | 49469289 ~ 49471615 (+) | True | AMCG00008272 |
| AMCG00008271 | mRNA | upstream | 472906 | 49404931 ~ 49407073 (+) | False | AMCG00008271 |
| AMCG00008288 | mRNA | downstream | 441361 | 50322713 ~ 50356404 (+) | True | AMCG00008288 |
| AMCG00008291 | mRNA | downstream | 477635 | 50358987 ~ 50359865 (+) | True | AMCG00008291 |
| AMCG00008292 | mRNA | downstream | 485092 | 50366444 ~ 50403958 (+) | True | AMCG00008292 |
| AMCG00008294 | mRNA | downstream | 569958 | 50451310 ~ 50460054 (+) | True | AMCG00008294 |
| AMCG00008296 | mRNA | downstream | 681402 | 50562754 ~ 50582183 (+) | True | AMCG00008296 |
| TU37330 | other | upstream | 461233 | 49404856 ~ 49418746 (+) | True | AMCG00008271 |
| TU37226 | other | upstream | 708962 | 49163816 ~ 49171017 (+) | True | AMCG00008263 |
| TU36912 | other | upstream | 1963722 | 47913868 ~ 47916257 (+) | False | AMCG00008241 |
| TU36905 | other | upstream | 1989296 | 47863569 ~ 47890683 (+) | False | AMCG00008242 |
| TU37559 | other | downstream | 470175 | 50351527 ~ 50352794 (+) | False | AMCG00008288 |
| TU37728 | other | downstream | 1545229 | 51426581 ~ 51428055 (+) | True | G30166 |
| TU37800 | other | downstream | 2219410 | 52100762 ~ 52101524 (+) | True | G30232 |
| TU37873 | other | downstream | 2496977 | 52378329 ~ 52378776 (+) | True | G30299 |
| TU37877 | other | downstream | 2499989 | 52381341 ~ 52382418 (+) | True | G30300 |
