Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28611 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G22816 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 12952875 ~ 12953096 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1901605 | alpha-amino acid metabolic process | biological_process |
| GO:1901607 | alpha-amino acid biosynthetic process | biological_process |
| GO:0008652 | cellular amino acid biosynthetic process | biological_process |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28572 | lncRNA | upstream | 1054738 | 11897543 ~ 11898137 (+) | True | G22781 |
| TU28566 | lncRNA | upstream | 1073269 | 11879400 ~ 11879606 (+) | True | G22775 |
| TU28564 | lncRNA | upstream | 1075013 | 11877505 ~ 11877862 (+) | True | G22773 |
| TU28561 | lncRNA | upstream | 1086391 | 11866163 ~ 11866484 (+) | True | G22770 |
| TU28560 | lncRNA | upstream | 1086851 | 11865436 ~ 11866024 (+) | True | G22769 |
| TU28632 | lncRNA | downstream | 398530 | 13351626 ~ 13351919 (+) | True | G22837 |
| TU28634 | lncRNA | downstream | 400517 | 13353613 ~ 13354456 (+) | True | G22839 |
| TU28640 | lncRNA | downstream | 530399 | 13483495 ~ 13492334 (+) | True | G22844 |
| TU28694 | lncRNA | downstream | 678450 | 13631546 ~ 13631960 (+) | True | G22887 |
| TU28695 | lncRNA | downstream | 684328 | 13637424 ~ 13637624 (+) | True | G22888 |
| AMCG00007311 | mRNA | upstream | 1349157 | 11588634 ~ 11603718 (+) | True | AMCG00007311 |
| AMCG00007310 | mRNA | upstream | 2175168 | 10758834 ~ 10777707 (+) | True | AMCG00007310 |
| AMCG00007306 | mRNA | upstream | 2209200 | 10739045 ~ 10743675 (+) | True | AMCG00007306 |
| AMCG00007305 | mRNA | upstream | 2285580 | 10660181 ~ 10667295 (+) | True | AMCG00007305 |
| AMCG00007308 | mRNA | upstream | 2297886 | 10628350 ~ 10654989 (+) | True | AMCG00007308 |
| AMCG00007317 | mRNA | downstream | 588660 | 13541756 ~ 13551121 (+) | True | AMCG00007317 |
| AMCG00007321 | mRNA | downstream | 670048 | 13623144 ~ 13624807 (+) | True | AMCG00007321 |
| AMCG00007322 | mRNA | downstream | 693531 | 13646627 ~ 13647013 (+) | True | AMCG00007322 |
| AMCG00007328 | mRNA | downstream | 1022209 | 13975305 ~ 13981853 (+) | True | AMCG00007328 |
| AMCG00007327 | mRNA | downstream | 1096297 | 14049393 ~ 14064082 (+) | True | AMCG00007327 |
| TU28420 | other | upstream | 2339771 | 10611196 ~ 10613104 (+) | True | AMCG00007307 |
| TU28037 | other | upstream | 3453147 | 9436524 ~ 9499728 (+) | True | G22372 |
| TU27900 | other | upstream | 4241564 | 8704657 ~ 8711311 (+) | True | AMCG00007253 |
| TU27825 | other | upstream | 4556633 | 8367436 ~ 8396242 (+) | True | AMCG00007243 |
| TU27445 | other | upstream | 5573929 | 7374323 ~ 7378946 (+) | True | G21891 |
| TU28829 | other | downstream | 1525577 | 14478673 ~ 14489692 (+) | True | AMCG00007337 |
| TU28988 | other | downstream | 2333401 | 15286497 ~ 15287960 (+) | False | AMCG00007352 |
| TU29675 | other | downstream | 5245672 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU29676 | other | downstream | 5253982 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29705 | other | downstream | 5337012 | 18290108 ~ 18292338 (+) | True | G23724 |
