Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28695 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G22888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 13637424 ~ 13637624 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28694 | lncRNA | upstream | 5464 | 13631546 ~ 13631960 (+) | True | G22887 |
| TU28640 | lncRNA | upstream | 145090 | 13483495 ~ 13492334 (+) | True | G22844 |
| TU28634 | lncRNA | upstream | 282968 | 13353613 ~ 13354456 (+) | True | G22839 |
| TU28632 | lncRNA | upstream | 285505 | 13351626 ~ 13351919 (+) | True | G22837 |
| TU28611 | lncRNA | upstream | 684328 | 12952875 ~ 12953096 (+) | True | G22816 |
| TU28701 | lncRNA | downstream | 39333 | 13676957 ~ 13677701 (+) | True | G22893 |
| TU28748 | lncRNA | downstream | 308014 | 13945638 ~ 13946065 (+) | True | G22930 |
| TU28750 | lncRNA | downstream | 384467 | 14022091 ~ 14022317 (+) | True | G22932 |
| TU28753 | lncRNA | downstream | 403168 | 14040792 ~ 14041060 (+) | True | G22935 |
| TU28761 | lncRNA | downstream | 427326 | 14064950 ~ 14065208 (+) | True | G22940 |
| AMCG00007321 | mRNA | upstream | 12617 | 13623144 ~ 13624807 (+) | True | AMCG00007321 |
| AMCG00007317 | mRNA | upstream | 86303 | 13541756 ~ 13551121 (+) | True | AMCG00007317 |
| AMCG00007311 | mRNA | upstream | 2033706 | 11588634 ~ 11603718 (+) | True | AMCG00007311 |
| AMCG00007310 | mRNA | upstream | 2859717 | 10758834 ~ 10777707 (+) | True | AMCG00007310 |
| AMCG00007306 | mRNA | upstream | 2893749 | 10739045 ~ 10743675 (+) | True | AMCG00007306 |
| AMCG00007322 | mRNA | downstream | 9003 | 13646627 ~ 13647013 (+) | True | AMCG00007322 |
| AMCG00007328 | mRNA | downstream | 337681 | 13975305 ~ 13981853 (+) | True | AMCG00007328 |
| AMCG00007327 | mRNA | downstream | 411769 | 14049393 ~ 14064082 (+) | True | AMCG00007327 |
| AMCG00007329 | mRNA | downstream | 520560 | 14158184 ~ 14185574 (+) | True | AMCG00007329 |
| AMCG00007332 | mRNA | downstream | 728084 | 14365708 ~ 14383919 (+) | True | AMCG00007332 |
| TU28420 | other | upstream | 3024320 | 10611196 ~ 10613104 (+) | True | AMCG00007307 |
| TU28037 | other | upstream | 4137696 | 9436524 ~ 9499728 (+) | True | G22372 |
| TU27900 | other | upstream | 4926113 | 8704657 ~ 8711311 (+) | True | AMCG00007253 |
| TU27825 | other | upstream | 5241182 | 8367436 ~ 8396242 (+) | True | AMCG00007243 |
| TU27445 | other | upstream | 6258478 | 7374323 ~ 7378946 (+) | True | G21891 |
| TU28829 | other | downstream | 841049 | 14478673 ~ 14489692 (+) | True | AMCG00007337 |
| TU28988 | other | downstream | 1648873 | 15286497 ~ 15287960 (+) | False | AMCG00007352 |
| TU29675 | other | downstream | 4561144 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU29676 | other | downstream | 4569454 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29705 | other | downstream | 4652484 | 18290108 ~ 18292338 (+) | True | G23724 |
