RNA id: TU28753



Basic Information


Item Value
RNA id TU28753
length 269
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G22935
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 14040792 ~ 14041060 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AAAGATTCGAAGTAGGTGAGCTCATAGAGTTTTTAATTAGAGCATAAtaacatttatgttttgtgaGCTTTTTGTTGCTAACAAGAGTAGGTATATTGGGAGTTAACTTCCACAGCAGATTGTGTGACCTGAGTTTGGAGTTGTCAGTACCTACCTTAATTCAATGTTGAAGGCAGGGTTGACATGCAGTGTCCATTCACAGTGTGCATTGGTGGGGTAACTTTCTATAGCAATGTAACCCCTAGATGCATTGATAACTCCTCCACATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU28750 lncRNA upstream 18475 14022091 ~ 14022317 (+) True G22932
TU28748 lncRNA upstream 94727 13945638 ~ 13946065 (+) True G22930
TU28701 lncRNA upstream 363091 13676957 ~ 13677701 (+) True G22893
TU28695 lncRNA upstream 403168 13637424 ~ 13637624 (+) True G22888
TU28694 lncRNA upstream 408832 13631546 ~ 13631960 (+) True G22887
TU28761 lncRNA downstream 23890 14064950 ~ 14065208 (+) True G22940
TU28765 lncRNA downstream 24311 14065371 ~ 14065644 (+) True G22944
TU28789 lncRNA downstream 135675 14176735 ~ 14215056 (+) False G22962
TU28788 lncRNA downstream 169093 14210153 ~ 14215056 (+) True G22962
TU28809 lncRNA downstream 245073 14286133 ~ 14290625 (+) True G22979
AMCG00007328 mRNA upstream 58939 13975305 ~ 13981853 (+) True AMCG00007328
AMCG00007322 mRNA upstream 393779 13646627 ~ 13647013 (+) True AMCG00007322
AMCG00007321 mRNA upstream 415985 13623144 ~ 13624807 (+) True AMCG00007321
AMCG00007317 mRNA upstream 489671 13541756 ~ 13551121 (+) True AMCG00007317
AMCG00007311 mRNA upstream 2437074 11588634 ~ 11603718 (+) True AMCG00007311
AMCG00007327 mRNA downstream 8333 14049393 ~ 14064082 (+) True AMCG00007327
AMCG00007329 mRNA downstream 117124 14158184 ~ 14185574 (+) True AMCG00007329
AMCG00007332 mRNA downstream 324648 14365708 ~ 14383919 (+) True AMCG00007332
AMCG00007335 mRNA downstream 398266 14439326 ~ 14473693 (+) True AMCG00007335
AMCG00007337 mRNA downstream 437703 14478763 ~ 14479838 (+) False AMCG00007337
TU28420 other upstream 3427688 10611196 ~ 10613104 (+) True AMCG00007307
TU28037 other upstream 4541064 9436524 ~ 9499728 (+) True G22372
TU27900 other upstream 5329481 8704657 ~ 8711311 (+) True AMCG00007253
TU27825 other upstream 5644550 8367436 ~ 8396242 (+) True AMCG00007243
TU27445 other upstream 6661846 7374323 ~ 7378946 (+) True G21891
TU28829 other downstream 437613 14478673 ~ 14489692 (+) True AMCG00007337
TU28988 other downstream 1245437 15286497 ~ 15287960 (+) False AMCG00007352
TU29675 other downstream 4157708 18198768 ~ 18201960 (+) True AMCG00007417
TU29676 other downstream 4166018 18207078 ~ 18208308 (+) True G23698
TU29705 other downstream 4249048 18290108 ~ 18292338 (+) True G23724

Expression Profile