RNA id: TU36703



Basic Information


Item Value
RNA id TU36703
length 464
lncRNA type intronic
GC content 0.46
exon number 1
gene id G29291
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45887949 ~ 45888412 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cttccaacttgtattcatccccatcattttctgtaagccatgtttctgtcactcctacaacatcatagtcacacgccagcactgtggcttccaagtctaacatcttggttacttatactcctggcattgaggtacaaacatttcaggactttcctactggcagtttcccttggttttctttccttggtggaaaatctcccattgtcagagctccctgcccccctggttcctagtttaaatgattctcaatttcactgcacatacgctctcccaatgcattagccccccttctgtttagatgtagaccatccagtttgtacaggtcccatctatcccagaagaaagaccaatgctccataaacctaaacccctcttccctacaccaagctttcaaccacgtgttaaactttctaatctctgcctgtctccctggcctggcacgtggtaccggaagtatttcagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36682 lncRNA upstream 153688 45725983 ~ 45734261 (+) True G29271
TU36579 lncRNA upstream 345743 45539769 ~ 45542206 (+) True G29223
TU36491 lncRNA upstream 509596 45378011 ~ 45378353 (+) True G29153
TU36485 lncRNA upstream 533870 45353716 ~ 45354079 (+) True G29148
TU36298 lncRNA upstream 1071286 44768677 ~ 44816663 (+) True G28991
TU36736 lncRNA downstream 204496 46092908 ~ 46093489 (+) True G29320
TU36779 lncRNA downstream 380263 46268675 ~ 46268989 (+) True G29355
TU36782 lncRNA downstream 590080 46478492 ~ 46478774 (+) True G29358
TU36795 lncRNA downstream 621972 46510384 ~ 46531909 (+) True G29368
TU36800 lncRNA downstream 646555 46534967 ~ 46535184 (+) True G29372
AMCG00008212 mRNA upstream 173906 45708568 ~ 45714043 (+) True AMCG00008212
AMCG00008211 mRNA upstream 249160 45599200 ~ 45638789 (+) True AMCG00008211
AMCG00008210 mRNA upstream 398983 45488632 ~ 45488966 (+) True AMCG00008210
AMCG00008198 mRNA upstream 400982 45484630 ~ 45486967 (+) True AMCG00008198
AMCG00008205 mRNA upstream 419490 45443938 ~ 45468459 (+) True AMCG00008205
AMCG00008219 mRNA downstream 151536 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008220 mRNA downstream 188895 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008221 mRNA downstream 235718 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008226 mRNA downstream 642038 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008232 mRNA downstream 1734540 47622952 ~ 47633651 (+) False AMCG00008232
TU36524 other upstream 446885 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 544035 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 716121 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 851533 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2586527 43292596 ~ 43301422 (+) False AMCG00008132
TU36777 other downstream 379479 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 1691801 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1706692 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1738884 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1743778 47632190 ~ 47637376 (+) True AMCG00008232

Expression Profile