RNA id: TU36815



Basic Information


Item Value
RNA id TU36815
length 358
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G29387
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47038464 ~ 47038892 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtgttttgggtcattgtcatgctggaatacccatccacgacccattttcaatgccctggctgagggaaggaggttctcacccaagatttgacggtacatggccccgtccattgTCCcattgatgcggtgcagttgtcctgtccccttagcagaaaaacacccccaaagcataatgtttccacctccatgtttgacggtggggatggtgttcttggggtcattcctcctcctccaaacacggcgagttgagttgatgccaaagagctcgattttggtctcatctgaccacaacactttcacccagttctcctccctttaagagagtgctcctaatctcagctcgttacctgtataaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36804 lncRNA upstream 314569 46723633 ~ 46723895 (+) True G29376
TU36800 lncRNA upstream 503280 46534967 ~ 46535184 (+) True G29372
TU36795 lncRNA upstream 506555 46510384 ~ 46531909 (+) True G29368
TU36782 lncRNA upstream 559690 46478492 ~ 46478774 (+) True G29358
TU36779 lncRNA upstream 769475 46268675 ~ 46268989 (+) True G29355
TU36833 lncRNA downstream 373467 47412359 ~ 47412566 (+) True G29404
TU36841 lncRNA downstream 526449 47565341 ~ 47565553 (+) True G29412
TU36847 lncRNA downstream 538784 47577676 ~ 47578641 (+) True G29417
TU36849 lncRNA downstream 550621 47589513 ~ 47589814 (+) True G29419
TU36852 lncRNA downstream 560342 47599234 ~ 47599468 (+) True G29422
AMCG00008226 mRNA upstream 507706 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008221 mRNA upstream 907447 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008220 mRNA upstream 947471 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 969646 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 1126857 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008232 mRNA downstream 584060 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 675441 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 762206 47801098 ~ 47813090 (+) True AMCG00008239
AMCG00008242 mRNA downstream 851090 47889982 ~ 47892071 (+) True AMCG00008242
AMCG00008243 mRNA downstream 857026 47895918 ~ 47908312 (+) True AMCG00008243
TU36777 other upstream 770137 46267891 ~ 46268327 (+) True G29353
TU36524 other upstream 1597400 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 1694550 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 1866636 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 2002048 45023148 ~ 45036416 (+) True AMCG00008177
TU36848 other downstream 541321 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 556212 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 588404 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 593298 47632190 ~ 47637376 (+) True AMCG00008232
TU36882 other downstream 625625 47664517 ~ 47715537 (+) False AMCG00008238

Expression Profile