RNA id: TU37513



Basic Information


Item Value
RNA id TU37513
length 236
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G29979
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50095038 ~ 50095273 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtctctgtacattgctgcattcatctttcccttgatcctgactagtctcccagttcctgccgctgaaaaacatccccacagcacgatgctgccaccaccatgcttcactgtagggatggtattggccaggtgatgagcggtgcctggtttcctccagacatgacgcttgccattcaggccaaagagttcaatctttgtttcatcagaccagagaattttgtttctcatggtctgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37507 lncRNA upstream 41067 50053713 ~ 50053971 (+) True G29973
TU37354 lncRNA upstream 156692 49515484 ~ 49938346 (+) True G29848
TU37396 lncRNA upstream 237044 49839512 ~ 49857994 (+) True AMCG00008279
TU37395 lncRNA upstream 255714 49838005 ~ 49839324 (+) True G29883
TU37386 lncRNA upstream 297055 49796444 ~ 49797983 (+) True G29877
TU37521 lncRNA downstream 30417 50125690 ~ 50126131 (+) True G29986
TU37525 lncRNA downstream 52376 50147649 ~ 50148723 (+) True G29990
TU37526 lncRNA downstream 60431 50155704 ~ 50156262 (+) True G29991
TU37552 lncRNA downstream 171950 50267223 ~ 50267450 (+) True G30016
TU37553 lncRNA downstream 178462 50273735 ~ 50274183 (+) True G30017
AMCG00008283 mRNA upstream 213686 49879979 ~ 49881352 (+) True AMCG00008283
AMCG00008279 mRNA upstream 236462 49842117 ~ 49858576 (+) False AMCG00008279
AMCG00008281 mRNA upstream 498245 49587067 ~ 49596793 (+) True AMCG00008281
AMCG00008280 mRNA upstream 534958 49549906 ~ 49560080 (+) True AMCG00008280
AMCG00008272 mRNA upstream 623423 49469289 ~ 49471615 (+) True AMCG00008272
AMCG00008288 mRNA downstream 227440 50322713 ~ 50356404 (+) True AMCG00008288
AMCG00008291 mRNA downstream 263714 50358987 ~ 50359865 (+) True AMCG00008291
AMCG00008292 mRNA downstream 271171 50366444 ~ 50403958 (+) True AMCG00008292
AMCG00008294 mRNA downstream 356037 50451310 ~ 50460054 (+) True AMCG00008294
AMCG00008296 mRNA downstream 467481 50562754 ~ 50582183 (+) True AMCG00008296
TU37330 other upstream 676292 49404856 ~ 49418746 (+) True AMCG00008271
TU37226 other upstream 924021 49163816 ~ 49171017 (+) True AMCG00008263
TU36912 other upstream 2178781 47913868 ~ 47916257 (+) False AMCG00008241
TU36905 other upstream 2204355 47863569 ~ 47890683 (+) False AMCG00008242
TU37559 other downstream 256254 50351527 ~ 50352794 (+) False AMCG00008288
TU37728 other downstream 1331308 51426581 ~ 51428055 (+) True G30166
TU37800 other downstream 2005489 52100762 ~ 52101524 (+) True G30232
TU37873 other downstream 2283056 52378329 ~ 52378776 (+) True G30299
TU37877 other downstream 2286068 52381341 ~ 52382418 (+) True G30300

Expression Profile