RNA id: TU37654



Basic Information


Item Value
RNA id TU37654
length 216
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G30102
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50792075 ~ 50792290 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CATGTGTCTTCTCTGTGAACACCACTTTGGAGTCAGAGGTGAAGTTCTGCCCTGTCAGGATCATCTGTTGCCCCCCAAGGATGGAGCAGCTTTCTGTGTCCTGCTTCTCAACCATAGGGAGCTCATGAGCAGATCTCTGGGCTGTGAACAGAGAGGGGACAGTGAGAAGGACACATCAGGTACCCAGAGCAAGCAAAGTCTCATGGGCTTTCAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37650 lncRNA upstream 39768 50750380 ~ 50752307 (+) True G30099
TU37632 lncRNA upstream 236486 50555384 ~ 50555589 (+) True G30083
TU37627 lncRNA upstream 256088 50535774 ~ 50535987 (+) True G30078
TU37622 lncRNA upstream 261328 50528533 ~ 50530747 (+) True G30073
TU37548 lncRNA upstream 343110 50445857 ~ 50448965 (+) True G30012
TU37656 lncRNA downstream 5830 50798120 ~ 50798319 (+) True G30104
TU37686 lncRNA downstream 214087 51006377 ~ 51010069 (+) True G30132
TU37694 lncRNA downstream 275850 51068140 ~ 51068707 (+) True G30139
TU37703 lncRNA downstream 385889 51178179 ~ 51178383 (+) True G30146
TU37720 lncRNA downstream 587278 51379568 ~ 51379793 (+) True G30158
AMCG00008296 mRNA upstream 209892 50562754 ~ 50582183 (+) True AMCG00008296
AMCG00008294 mRNA upstream 332021 50451310 ~ 50460054 (+) True AMCG00008294
AMCG00008292 mRNA upstream 388117 50366444 ~ 50403958 (+) True AMCG00008292
AMCG00008291 mRNA upstream 432210 50358987 ~ 50359865 (+) True AMCG00008291
AMCG00008288 mRNA upstream 435671 50322713 ~ 50356404 (+) True AMCG00008288
AMCG00008304 mRNA downstream 541013 51333303 ~ 51336685 (+) True AMCG00008304
AMCG00008309 mRNA downstream 743180 51535470 ~ 51542896 (+) True AMCG00008309
AMCG00008308 mRNA downstream 760316 51552606 ~ 51560087 (+) True AMCG00008308
AMCG00008310 mRNA downstream 860074 51652364 ~ 51657000 (+) True AMCG00008310
AMCG00008316 mRNA downstream 1474143 52266433 ~ 52311801 (+) True AMCG00008316
TU37559 other upstream 439281 50351527 ~ 50352794 (+) False AMCG00008288
TU37330 other upstream 1373329 49404856 ~ 49418746 (+) True AMCG00008271
TU37226 other upstream 1621058 49163816 ~ 49171017 (+) True AMCG00008263
TU36912 other upstream 2875818 47913868 ~ 47916257 (+) False AMCG00008241
TU36904 other upstream 2901392 47889027 ~ 47890683 (+) False AMCG00008242
TU37728 other downstream 634291 51426581 ~ 51428055 (+) True G30166
TU37800 other downstream 1308472 52100762 ~ 52101524 (+) True G30232
TU37873 other downstream 1586039 52378329 ~ 52378776 (+) True G30299
TU37877 other downstream 1589051 52381341 ~ 52382418 (+) True G30300

Expression Profile